RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SMPXQ9UHP9 88 aa15.73■□□□□ 0.11
SMARCB1-202ENST00000344921 E5RGE8 158 aa15.72■□□□□ 0.11
SMARCB1-202ENST00000344921 DLK1P80370 383 aa15.72■□□□□ 0.11
SMARCB1-202ENST00000344921 FCN2Q15485 313 aa15.72■□□□□ 0.11
SMARCB1-202ENST00000344921 STX12Q86Y82 276 aa15.72■□□□□ 0.11
SMARCB1-202ENST00000344921 TMEM217Q8N7C4 229 aa15.72■□□□□ 0.11
SMARCB1-202ENST00000344921 OR51G1Q8NGK1 321 aa15.72■□□□□ 0.11
SMARCB1-202ENST00000344921 RHPN1-AS1Q9BWJ2 59 aa15.72■□□□□ 0.11
SMARCB1-202ENST00000344921 IGKV1D-37A0A075B6S9 117 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 PET100P0DJ07 73 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 BMI1P35226 326 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 ARL16Q0P5N6 197 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 TMEM144Q7Z5S9 345 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 THAP8Q8NA92 274 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 TRGV9Q99603 122 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 NPVFQ9HCQ7 196 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 OR5AC2Q9NZP5 309 aa15.71■□□□□ 0.11
SMARCB1-202ENST00000344921 IGKV1OR2-108A0A075B7D4 117 aa15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 K7EIL1 84 aa15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 SCAF4O95104 1147 aaKnown RBP15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 OR2F1Q13607 317 aa15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 LAMTOR1Q6IAA8 161 aa15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 TMEM61Q8N0U2 210 aa15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 TMEM252Q8N6L7 170 aa15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 NARS2Q96I59 477 aaKnown RBP15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 PBDC1Q9BVG4 233 aa15.71■□□□□ 0.1
SMARCB1-202ENST00000344921 IGHV3-66A0A0C4DH42 116 aa15.7■□□□□ 0.1
SMARCB1-202ENST00000344921 CHEK1O14757 476 aa15.7■□□□□ 0.1
SMARCB1-202ENST00000344921 SULT1A1P50225 295 aa15.7■□□□□ 0.1
SMARCB1-202ENST00000344921 IFITM2Q01629 132 aa15.7■□□□□ 0.1
SMARCB1-202ENST00000344921 SLC38A11Q08AI6 406 aa15.7■□□□□ 0.1
SMARCB1-202ENST00000344921 OR11H7Q8NGC8 314 aa15.7■□□□□ 0.1
SMARCB1-202ENST00000344921 IGSF23A1L1A6 192 aa15.69■□□□□ 0.1
SMARCB1-202ENST00000344921 MPC2O95563 127 aa15.69■□□□□ 0.1
SMARCB1-202ENST00000344921 APOHP02749 345 aaPredicted RBP15.69■□□□□ 0.1
SMARCB1-202ENST00000344921 GTSCR1Q86UQ5 136 aa15.69■□□□□ 0.1
SMARCB1-202ENST00000344921 LILRB2Q8N423 598 aa15.69■□□□□ 0.1
SMARCB1-202ENST00000344921 GGACTQ9BVM4 153 aa15.69■□□□□ 0.1
SMARCB1-202ENST00000344921 DNAH3Q8TD57 4116 aa15.69■□□□□ 0.1
SMARCB1-202ENST00000344921 A0A1W2PS18 150 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 FNDC10F2Z333 226 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 H0YIZ8 118 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 HBG1P69891 147 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 HBG2P69892 147 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 ST8SIA2Q92186 375 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 RNF125Q96EQ8 232 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 RNF2Q99496 336 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 SLC25A31Q9H0C2 315 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 TMEM231Q9H6L2 316 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 TRAV25A0A0B4J276 109 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 ZNF785A8K8V0 405 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 CRYBB3P26998 211 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 S100A11P31949 105 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 P2RY1P47900 373 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 LYZP61626 148 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 USF2Q15853 346 aaPredicted RBP15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 TEPPQ6URK8 271 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 RABAC1Q9UI14 185 aa15.68■□□□□ 0.1
SMARCB1-202ENST00000344921 IGKV3-7A0A075B6H7 116 aa15.66■□□□□ 0.1
SMARCB1-202ENST00000344921 RPL11P62913 178 aaKnown RBP15.66■□□□□ 0.1
SMARCB1-202ENST00000344921 BPIFCQ8NFQ6 507 aa15.66■□□□□ 0.1
SMARCB1-202ENST00000344921 GRAMD2BQ96HH9 432 aa15.66■□□□□ 0.1
SMARCB1-202ENST00000344921 RNF126Q9BV68 326 aa15.66■□□□□ 0.1
SMARCB1-202ENST00000344921 VSIRQ9H7M9 311 aa15.66■□□□□ 0.1
SMARCB1-202ENST00000344921 GATA2P23769 480 aaPredicted RBP15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 NHLH2Q02577 135 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 ZFP69Q49AA0 526 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 TCF24Q7RTU0 167 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 THAP6Q8TBB0 222 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 UQCC1Q9NVA1 299 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 MBD2Q9UBB5 411 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 TSPAN4O14817 238 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 CFDP00746 253 aaPredicted RBP15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 CD81P60033 236 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 EWSR1Q01844 656 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 CYP2G1PQ6ZSU1 146 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 PFDN2Q9UHV9 154 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 SMAD5-AS1Q9Y6J3 95 aa15.65■□□□□ 0.1
SMARCB1-202ENST00000344921 DFFBO76075 338 aa15.64■□□□□ 0.09
SMARCB1-202ENST00000344921 CD5P06127 495 aa15.64■□□□□ 0.09
SMARCB1-202ENST00000344921 SPAG8Q99932 426 aaPredicted RBP15.64■□□□□ 0.09
SMARCB1-202ENST00000344921 ORM2P19652 201 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 ATP6V1FQ16864 119 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 TMEM182Q6ZP80 229 aaPredicted RBP15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 SLC7A5P1Q8MH63 180 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 OR5C1Q8NGR4 320 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 ST6GAL2Q96JF0 529 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 TMEM147Q9BVK8 224 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 LSM4Q9Y4Z0 139 aaKnown RBP15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 UBE2L5PA0A1B0GUS4 154 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 GIPP09681 153 aaPredicted RBP15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 SELENOTP62341 195 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 BAXQ07812 192 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 RAB31Q13636 194 aa15.63■□□□□ 0.09
SMARCB1-202ENST00000344921 AGPAT2O15120 278 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 CD7P09564 240 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 TFPI2P48307 235 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 PAFAH1B2P68402 229 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 FGL1Q08830 312 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 Q8N1Y9 231 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms