RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 IGHV3-72A0A0B4J1Y9 119 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 IGHV1-24A0A0C4DH33 117 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 H7C2G1 150 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 SIVA1O15304 175 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 CELA3BP08861 270 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 CECR9P0C854 216 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 SP9P0CG40 484 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 PLNP26678 52 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 CDCP2Q5VXM1 449 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF524Q96C55 264 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 AKIRIN1Q9H9L7 192 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 TDGF1P13385 188 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 RPL15P61313 204 aaKnown RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 SCGB3A1Q96QR1 104 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 MUC22E2RYF6 1773 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 IL18BPO95998 194 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 TOMM40O96008 361 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 COX8AP10176 69 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 BCL6BQ8N143 479 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 WIPF2Q8TF74 440 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 ASCC3Q8N3C0 2202 aaKnown RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 PPIAL4CA0A0B4J2A2 164 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 C9orf118A6NHY6 69 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 PATE3B3GLJ2 98 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 SMAD7O15105 426 aaKnown RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 PPIAL4GP0DN37 164 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 FAM159AQ6UWV7 190 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 PPP1R27Q86WC6 154 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF784Q8NCA9 323 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 HILPDAQ9Y5L2 63 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 IGHV2-70DA0A0C4DH43 119 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 CACNG7P62955 275 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 TMEM75Q8N9X5 138 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 DIDO1Q9BTC0 2240 aaKnown RBP3.94□□□□□ -1.78
CSMD3-203ENST00000343508 K7EP13 123 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 IGKV1D-33P01593 117 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 IGKV1-33P01594 117 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 NPPCP23582 126 aa3.94□□□□□ -1.78
CSMD3-203ENST00000343508 IGLC7A0M8Q6 106 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 CGB1A6NKQ9 187 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 LAGE3Q14657 143 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 SPATA31B1PQ5VZV4 182 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF329Q86UD4 541 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 OR10W1Q8NGF6 305 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 F2RL2O00254 374 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 NDUFA3O95167 84 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 IGLL1P15814 213 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 SLAQ13239 276 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 C11orf52Q96A22 123 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 TRGV9Q99603 122 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 CELA3AP09093 270 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 SCRT1Q9BWW7 348 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 VDAC2P45880 294 aaPredicted RBP3.93□□□□□ -1.78
CSMD3-203ENST00000343508 ZNF562Q6V9R5 426 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 ASCL2Q99929 193 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 NPIPB6E9PJ23 425 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 TMEM170BQ5T4T1 132 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 RNF125Q96EQ8 232 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 A0A1B0GUS0 222 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 TMPRSS3P57727 454 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 TM4SF20Q53R12 229 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 A0A1W2PRD5 423 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 A0A1W2PRF3 423 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 A0A1W2PRM7 423 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 KLK10O43240 276 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 UNQ6494/PRO21346Q6UXR6 183 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 STPG4Q8N801 248 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 PSG8Q9UQ74 426 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 H3BTX0 84 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 CCL25O15444 150 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 TSPAN13O95857 204 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 TCRAP04437 139 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 PDE6HQ13956 83 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 PCNX3Q9H6A9 2034 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 FER1L5A0AVI2 2057 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 PLA2G2EQ9NZK7 142 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 EML6Q6ZMW3 1958 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 RNFT1Q5M7Z0 435 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 BVES-AS1Q5T3Y7 98 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 ZFAND6Q6FIF0 208 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 EEF1AKMT3Q96AZ1 226 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 KLK15Q9H2R5 256 aa3.93□□□□□ -1.78
CSMD3-203ENST00000343508 A8MWV9 139 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 B3GALT5-AS1P59052 145 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 RSPO1Q2MKA7 263 aaPredicted RBP3.92□□□□□ -1.78
CSMD3-203ENST00000343508 TRAV5A0A0B4J249 113 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 EMP1P54849 157 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 BMPERQ8N8U9 685 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 CNTRLQ7Z7A1 2325 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 RHOGP84095 191 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 LGALS9BQ3B8N2 356 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 LGALS9CQ6DKI2 356 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 CD177Q8N6Q3 437 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 YPEL4Q96NS1 127 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 CHTOPQ9Y3Y2 248 aaKnown RBP3.92□□□□□ -1.78
CSMD3-203ENST00000343508 TRAV8-2A0A0B4J237 113 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 ARPC1AQ92747 370 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 RCHY1Q96PM5 261 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 IGHV1-18A0A0C4DH31 117 aa3.92□□□□□ -1.78
CSMD3-203ENST00000343508 A0A1W2PPM0 123 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms