RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ARPC1AQ92747 370 aa6.65□□□□□ -1.34
UBE4B-202ENST00000343090 SEPSECSQ9HD40 501 aaKnown RBP6.65□□□□□ -1.34
UBE4B-202ENST00000343090 FANCMQ8IYD8 2048 aa6.65□□□□□ -1.35
UBE4B-202ENST00000343090 TRAV8-6A0A0B4J262 113 aa6.65□□□□□ -1.35
UBE4B-202ENST00000343090 CSRP1P21291 193 aaKnown RBP6.65□□□□□ -1.35
UBE4B-202ENST00000343090 FMC1Q96HJ9 113 aa6.65□□□□□ -1.35
UBE4B-202ENST00000343090 GGTLC1Q9BX51 225 aa6.65□□□□□ -1.35
UBE4B-202ENST00000343090 DOCK9Q9BZ29 2069 aa6.65□□□□□ -1.35
UBE4B-202ENST00000343090 CD5LO43866 347 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 PRCDQ00LT1 54 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 Q6P435 159 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 FER1L6-AS1Q8NA97 138 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 TSKUQ8WUA8 353 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF414Q96IQ9 312 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 RIF1Q5UIP0 2472 aaKnown RBP6.64□□□□□ -1.35
UBE4B-202ENST00000343090 NPIPB6E9PJ23 425 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 CD69Q07108 199 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF726P1Q15940 193 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 COA6Q5JTJ3 125 aaKnown RBP6.64□□□□□ -1.35
UBE4B-202ENST00000343090 PPP1R27Q86WC6 154 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 TNFRSF14Q92956 283 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 C9JCJ5 164 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 MLNRO43193 412 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 Q0VG73 95 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 KLRB1Q12918 225 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 MGST2Q99735 147 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 CSTL1Q9H114 145 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 TMEM133Q9H2Q1 129 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 OSTCQ9NRP0 149 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 MOB4Q9Y3A3 225 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 SPTBN1Q01082 2364 aaKnown RBP6.64□□□□□ -1.35
UBE4B-202ENST00000343090 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.64□□□□□ -1.35
UBE4B-202ENST00000343090 SRRM5B3KS81 715 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 FAM106AQ4KMX7 169 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 ANKRD39Q53RE8 183 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 SAMD5Q5TGI4 173 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 SYT8Q8NBV8 401 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 COQ2Q96H96 371 aa6.64□□□□□ -1.35
UBE4B-202ENST00000343090 ADIPOQQ15848 244 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF56Q15929 161 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 SRSF7Q16629 238 aaKnown RBP eCLIP6.63□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF418Q8TF45 676 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-202ENST00000343090 EPDR1Q9UM22 224 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 TCRBV4S1A1TA0A5B7 111 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 ANAPC10Q9UM13 185 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 LRRK1Q38SD2 2015 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 NOTCH4Q99466 2003 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 ANAPC1Q9H1A4 1944 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 IGKV1-6A0A0C4DH72 117 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 PPIFP30405 207 aaKnown RBP6.63□□□□□ -1.35
UBE4B-202ENST00000343090 PRSS8Q16651 343 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 CCL19Q99731 98 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 ZNF256Q9Y2P7 627 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-202ENST00000343090 PI4KAP42356 2102 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 FAM231BA6NCW3 169 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 PRSS2P07478 247 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 TMEM14EPQ6UXP3 125 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
UBE4B-202ENST00000343090 PLXNA4Q9HCM2 1894 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 TIMM23O14925 209 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 NBR2O15453 112 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 NUPR1O60356 82 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 PDLIM4P50479 330 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 DDB2Q92466 427 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 C1orf147Q96MC9 270 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-202ENST00000343090 LIME1Q9H400 295 aa6.63□□□□□ -1.35
UBE4B-202ENST00000343090 IGHV2-26A0A0B4J1V2 119 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 A0A1W2PRE2 83 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 HAX1O00165 279 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 STAG3L3P0CL85 134 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 NTF4P34130 210 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 GLMPQ8WWB7 406 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 MS4A6AQ9H2W1 248 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 PLSCR4Q9NRQ2 329 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 TMEM50AO95807 157 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 HSD52Q0P140 79 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 TMEM200BQ69YZ2 307 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 MYO7BQ6PIF6 2116 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 FOXL2NBQ6ZUU3 175 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 MDS2Q8NDY4 140 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 OR4X2Q8NGF9 303 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 MCRIP2Q9BUT9 160 aaKnown RBP6.62□□□□□ -1.35
UBE4B-202ENST00000343090 RPUSD1Q9UJJ7 312 aaKnown RBP6.62□□□□□ -1.35
UBE4B-202ENST00000343090 RAXQ9Y2V3 346 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 IGHV2-70DA0A0C4DH43 119 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 F2Z2F3 143 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 MLANAQ16655 118 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 FAM159AQ6UWV7 190 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 RNF125Q96EQ8 232 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 FOXC2Q99958 501 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 OTORQ9NRC9 128 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 ZNRD1Q9P1U0 126 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 A6NJY4 79 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 RAX2Q96IS3 184 aa6.62□□□□□ -1.35
UBE4B-202ENST00000343090 TICRRQ7Z2Z1 1910 aa6.61□□□□□ -1.35
UBE4B-202ENST00000343090 IGKV1D-17A0A075B6S4 117 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms