RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 DUXBA0A1W2PPF3 345 aa14.83□□□□□ -0.04
SYNE2-201ENST00000341472 INMT-MINDY4F8WBC2 141 aa14.83□□□□□ -0.04
SYNE2-201ENST00000341472 EIF2B2P49770 351 aaKnown RBP14.83□□□□□ -0.04
SYNE2-201ENST00000341472 LEMD1Q68G75 181 aa14.83□□□□□ -0.04
SYNE2-201ENST00000341472 STXBP6Q8NFX7 210 aa14.83□□□□□ -0.04
SYNE2-201ENST00000341472 CXorf65A6NEN9 183 aa14.82□□□□□ -0.04
SYNE2-201ENST00000341472 K7EQG2 157 aa14.82□□□□□ -0.04
SYNE2-201ENST00000341472 PRAF2O60831 178 aa14.82□□□□□ -0.04
SYNE2-201ENST00000341472 HNRNPCP07910 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
SYNE2-201ENST00000341472 GPX4P36969 197 aaPredicted RBP14.82□□□□□ -0.04
SYNE2-201ENST00000341472 FAM24BQ8N5W8 94 aa14.82□□□□□ -0.04
SYNE2-201ENST00000341472 TMEM217Q8N7C4 229 aa14.82□□□□□ -0.04
SYNE2-201ENST00000341472 LRTM2Q8N967 370 aa14.82□□□□□ -0.04
SYNE2-201ENST00000341472 HELTA6NFD8 242 aa14.81□□□□□ -0.04
SYNE2-201ENST00000341472 PITX3O75364 302 aa14.81□□□□□ -0.04
SYNE2-201ENST00000341472 SFT2D2O95562 160 aa14.81□□□□□ -0.04
SYNE2-201ENST00000341472 TOMM40O96008 361 aa14.81□□□□□ -0.04
SYNE2-201ENST00000341472 IL5P05113 134 aa14.81□□□□□ -0.04
SYNE2-201ENST00000341472 AP2S1P53680 142 aaPredicted RBP14.81□□□□□ -0.04
SYNE2-201ENST00000341472 C16orf54Q6UWD8 224 aa14.81□□□□□ -0.04
SYNE2-201ENST00000341472 GATAD1Q8WUU5 269 aa14.81□□□□□ -0.04
SYNE2-201ENST00000341472 PLECQ15149 4684 aaKnown RBP14.81□□□□□ -0.04
SYNE2-201ENST00000341472 IL4P05112 153 aa14.8□□□□□ -0.04
SYNE2-201ENST00000341472 OR4E1P0C645 316 aa14.8□□□□□ -0.04
SYNE2-201ENST00000341472 SLC25A6P12236 298 aa14.8□□□□□ -0.04
SYNE2-201ENST00000341472 ATF4P18848 351 aaPredicted RBP14.8□□□□□ -0.04
SYNE2-201ENST00000341472 ANXA7P20073 488 aaKnown RBP14.8□□□□□ -0.04
SYNE2-201ENST00000341472 EWSR1Q01844 656 aaKnown RBP eCLIP14.8□□□□□ -0.04
SYNE2-201ENST00000341472 PMS2P11Q13670 270 aa14.8□□□□□ -0.04
SYNE2-201ENST00000341472 STHQ8IWL8 128 aa14.8□□□□□ -0.04
SYNE2-201ENST00000341472 RARRES2Q99969 163 aa14.8□□□□□ -0.04
SYNE2-201ENST00000341472 GPN1Q9HCN4 374 aaPredicted RBP14.8□□□□□ -0.04
SYNE2-201ENST00000341472 TMED3Q9Y3Q3 217 aa14.8□□□□□ -0.04
SYNE2-201ENST00000341472 MED6O75586 246 aa14.79□□□□□ -0.04
SYNE2-201ENST00000341472 PSG1P11464 419 aa14.79□□□□□ -0.04
SYNE2-201ENST00000341472 PPP1R1AQ13522 171 aa14.79□□□□□ -0.04
SYNE2-201ENST00000341472 USF2Q15853 346 aaPredicted RBP14.79□□□□□ -0.04
SYNE2-201ENST00000341472 C4orf46Q504U0 113 aa14.79□□□□□ -0.04
SYNE2-201ENST00000341472 FAM90A26D6RGX4 464 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 CA1P00915 261 aaPredicted RBP14.78□□□□□ -0.04
SYNE2-201ENST00000341472 ZNF688P0C7X2 276 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 RAB11AP62491 216 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 DHRS2Q13268 280 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 GAMTQ14353 236 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 OR11H2Q8NH07 326 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 DCANP1Q8TF63 244 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 GLMPQ8WWB7 406 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 SLC35E1Q96K37 410 aa14.78□□□□□ -0.04
SYNE2-201ENST00000341472 C9orf170A2RU37 121 aa14.77□□□□□ -0.05
SYNE2-201ENST00000341472 ZFP92A6NM28 416 aa14.77□□□□□ -0.05
SYNE2-201ENST00000341472 HOXB5P09067 269 aa14.77□□□□□ -0.05
SYNE2-201ENST00000341472 IAPPP10997 89 aa14.77□□□□□ -0.05
SYNE2-201ENST00000341472 OR51G1Q8NGK1 321 aa14.77□□□□□ -0.05
SYNE2-201ENST00000341472 PFDN2Q9UHV9 154 aa14.77□□□□□ -0.05
SYNE2-201ENST00000341472 PAIP2BQ9ULR5 123 aaKnown RBP14.77□□□□□ -0.05
SYNE2-201ENST00000341472 LYSTQ99698 3801 aa14.76□□□□□ -0.05
SYNE2-201ENST00000341472 SNRPGP15A8MWD9 76 aa14.76□□□□□ -0.05
SYNE2-201ENST00000341472 BUB3O43684 328 aa14.76□□□□□ -0.05
SYNE2-201ENST00000341472 RPP30P78346 268 aaKnown RBP14.76□□□□□ -0.05
SYNE2-201ENST00000341472 CEMP1Q6PRD7 247 aaPredicted RBP14.76□□□□□ -0.05
SYNE2-201ENST00000341472 CIB3Q96Q77 187 aaPredicted RBP14.76□□□□□ -0.05
SYNE2-201ENST00000341472 NUPR2A6NF83 97 aa14.75□□□□□ -0.05
SYNE2-201ENST00000341472 KNCNA6PVL3 124 aa14.75□□□□□ -0.05
SYNE2-201ENST00000341472 FABP1P07148 127 aa14.75□□□□□ -0.05
SYNE2-201ENST00000341472 COQ8AQ8NI60 647 aa14.75□□□□□ -0.05
SYNE2-201ENST00000341472 ZNF431Q8TF32 576 aaPredicted RBP14.75□□□□□ -0.05
SYNE2-201ENST00000341472 RNF125Q96EQ8 232 aa14.75□□□□□ -0.05
SYNE2-201ENST00000341472 PBDC1Q9BVG4 233 aa14.75□□□□□ -0.05
SYNE2-201ENST00000341472 MAGT1Q9H0U3 335 aa14.75□□□□□ -0.05
SYNE2-201ENST00000341472 SYNGR2O43760 224 aa14.74□□□□□ -0.05
SYNE2-201ENST00000341472 ZNF90Q03938 601 aa14.74□□□□□ -0.05
SYNE2-201ENST00000341472 ACTL10Q5JWF8 245 aa14.74□□□□□ -0.05
SYNE2-201ENST00000341472 GGNBP1Q5YKI7 109 aa14.74□□□□□ -0.05
SYNE2-201ENST00000341472 MORN3Q6PF18 240 aaPredicted RBP14.74□□□□□ -0.05
SYNE2-201ENST00000341472 TRPT1Q86TN4 253 aaKnown RBP14.74□□□□□ -0.05
SYNE2-201ENST00000341472 RAB40CQ96S21 281 aa14.74□□□□□ -0.05
SYNE2-201ENST00000341472 IGKV1D-37A0A075B6S9 117 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 C7orf66A4D0T2 115 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 WRBO00258 174 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 NUP62P37198 522 aaPredicted RBP14.73□□□□□ -0.05
SYNE2-201ENST00000341472 TMEM41BQ5BJD5 291 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 PSMG4Q5JS54 123 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 OR8G2PQ6IF36 304 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 SIGLEC15Q6ZMC9 328 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 MITD1Q8WV92 249 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 SEC22CQ9BRL7 303 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 SEPSECSQ9HD40 501 aaKnown RBP14.73□□□□□ -0.05
SYNE2-201ENST00000341472 NRN1Q9NPD7 142 aa14.73□□□□□ -0.05
SYNE2-201ENST00000341472 KLK5Q9Y337 293 aaPredicted RBP14.73□□□□□ -0.05
SYNE2-201ENST00000341472 SPP1P10451 314 aa14.72□□□□□ -0.05
SYNE2-201ENST00000341472 SNRPD3P62318 126 aaKnown RBP14.72□□□□□ -0.05
SYNE2-201ENST00000341472 OR2F1Q13607 317 aa14.72□□□□□ -0.05
SYNE2-201ENST00000341472 Q6ZNX1 250 aa14.72□□□□□ -0.05
SYNE2-201ENST00000341472 C12orf45Q8N5I9 185 aaPredicted RBP14.72□□□□□ -0.05
SYNE2-201ENST00000341472 TRGV9Q99603 122 aa14.72□□□□□ -0.05
SYNE2-201ENST00000341472 GIG44P09565 113 aaPredicted RBP14.71□□□□□ -0.05
SYNE2-201ENST00000341472 IFNA21P01568 189 aa14.7□□□□□ -0.06
SYNE2-201ENST00000341472 LYZP61626 148 aa14.7□□□□□ -0.06
SYNE2-201ENST00000341472 ID3Q02535 119 aa14.7□□□□□ -0.06
SYNE2-201ENST00000341472 SPANXN5Q5MJ07 72 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms