RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TNFSF14O43557 240 aa7.82□□□□□ -1.16
PTCHD4-201ENST00000339488 IFITM1P13164 125 aa7.82□□□□□ -1.16
PTCHD4-201ENST00000339488 C1orf61Q13536 156 aa7.82□□□□□ -1.16
PTCHD4-201ENST00000339488 H2BFWTQ7Z2G1 175 aa7.82□□□□□ -1.16
PTCHD4-201ENST00000339488 GTSCR1Q86UQ5 136 aa7.82□□□□□ -1.16
PTCHD4-201ENST00000339488 OBP2BQ9NPH6 170 aa7.82□□□□□ -1.16
PTCHD4-201ENST00000339488 OBP2AQ9NY56 170 aa7.82□□□□□ -1.16
PTCHD4-201ENST00000339488 INTS1Q8N201 2190 aaKnown RBP7.82□□□□□ -1.16
PTCHD4-201ENST00000339488 PI4KAP42356 2102 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 IGHV3-20A0A0C4DH32 117 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 A0A0J9YW62 118 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 FRG2CA6NGY1 282 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 OTOL1A6NHN0 477 aaPredicted RBP7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 BRWD1-AS2P59051 145 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 ZFP2Q6ZN57 461 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 PRRG4Q9BZD6 226 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 LOC107984156A0A0G2JMH3 177 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 RRN3P1Q2M238 152 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 ARL17AQ8IVW1 177 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 NRGNQ92686 78 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 ZNF414Q96IQ9 312 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 ALKBH4Q9NXW9 302 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 KLK5Q9Y337 293 aaPredicted RBP7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 PRSS38A1L453 326 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 PYYP10082 97 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 TMEM42Q69YG0 159 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 DLL3Q9NYJ7 618 aa7.81□□□□□ -1.16
PTCHD4-201ENST00000339488 COL4A2P08572 1712 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 TET2Q6N021 2002 aaPredicted RBP7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 CENPVL3A0A0U1RRI6 287 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 EPOPA6NHQ4 379 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 PRR19A6NJB7 356 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 LTBRP36941 435 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 SRSF1Q07955 248 aaKnown RBP eCLIP7.8□□□□□ -1.161e-6■□□□□ 8.3
PTCHD4-201ENST00000339488 OR1C1Q15619 314 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 ZNF542PQ5EBM4 170 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 SPTSSAQ969W0 71 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 CDX2Q99626 313 aaPredicted RBP7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 TPPP3Q9BW30 176 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 FBXL15Q9H469 300 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 SNCGO76070 127 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 ERVK11-1P61568 191 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 IGLV3-21P80748 117 aaPredicted RBP7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 TCEAL8Q8IYN2 117 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 CHCHD5Q9BSY4 110 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 PKIBQ9C010 78 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 MAP1LC3AQ9H492 121 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 ENY2Q9NPA8 101 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 NOTCH4Q99466 2003 aa7.8□□□□□ -1.16
PTCHD4-201ENST00000339488 TRAV3A0A0B4J244 114 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 TRAV24A0A0B4J272 114 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 FCN3O75636 299 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 MYOD1P15172 320 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 MEOX1P50221 254 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 HOXA4Q00056 320 aaPredicted RBP7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 ZC2HC1BQ5TFG8 222 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 NABP1Q96AH0 204 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 SOX21Q9Y651 276 aaPredicted RBP7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 DSCAML1Q8TD84 2053 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 A0A1W2PQU0 124 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 H3BTX0 84 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 PLAUP00749 431 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 ZNF688P0C7X2 276 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 SRD5A1P18405 259 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 MAPKAPK5-AS1Q8N8E1 139 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 NABP2Q9BQ15 211 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 EDA2RQ9HAV5 297 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 AMMECR1Q9Y4X0 333 aaPredicted RBP7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 PLCE1Q9P212 2302 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 DCHS1Q96JQ0 3298 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 WDFY4Q6ZS81 3184 aa7.79□□□□□ -1.16
PTCHD4-201ENST00000339488 CXorf51AA0A1B0GTR3 108 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 IFI6P09912 130 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 P0C879 139 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 UBE2L3P68036 154 aaKnown RBP7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 RHBDD2Q6NTF9 364 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 ANKRD29Q8N6D5 301 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 PPDPFLQ8WWR9 84 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 RND1Q92730 232 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 FSCN3Q9NQT6 498 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 ONECUT1Q9UBC0 465 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 TRAV8-1A0A0A6YYK1 113 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 IGHV3-43A0A0B4J1X8 118 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 KIR2DS3K7RE56 304 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 CFIP05156 583 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 CELA2BP08218 269 aaPredicted RBP7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 IGHV3-43DP0DP04 118 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 KLF17Q5JT82 389 aaPredicted RBP7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 HIST1H4GQ99525 98 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 ADAMTS20P59510 1910 aa7.78□□□□□ -1.16
PTCHD4-201ENST00000339488 CFAP47Q6ZTR5 3102 aa7.77□□□□□ -1.16
PTCHD4-201ENST00000339488 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.16
PTCHD4-201ENST00000339488 A0A1W2PQF6 199 aa7.77□□□□□ -1.16
PTCHD4-201ENST00000339488 LINC00473A8K010 186 aa7.77□□□□□ -1.16
PTCHD4-201ENST00000339488 DEFB108AA8MXU0 73 aa7.77□□□□□ -1.16
PTCHD4-201ENST00000339488 IGHV3-13P01766 116 aa7.77□□□□□ -1.16
PTCHD4-201ENST00000339488 FGF12P61328 243 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms