RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 NPPCP23582 126 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 BMI1P35226 326 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 ZNF546Q86UE3 836 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 INO80EQ8NBZ0 244 aaPredicted RBP11.67□□□□□ -0.54
SEC13-201ENST00000337354 OR2K2Q8NGT1 345 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 AQP10Q96PS8 301 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 HSPB11Q9Y547 144 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 CMYA5Q8N3K9 4069 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 IGHV7-4-1A0A0J9YVY3 117 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 WI2-2373I1.2A0A1W2PRP0 233 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 G3V4G9 280 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 MPDU1O75352 247 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 DFFBO76075 338 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 IL4P05112 153 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 ADAMTSL5Q6ZMM2 481 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 CYP2G1PQ6ZSU1 146 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 BPIFCQ8NFQ6 507 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 METTL26Q96S19 204 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 SMPXQ9UHP9 88 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 PFDN2Q9UHV9 154 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 WDR83OSQ9Y284 106 aa11.67□□□□□ -0.54
SEC13-201ENST00000337354 A0A1W2PS18 150 aa11.66□□□□□ -0.54
SEC13-201ENST00000337354 CD5P06127 495 aa11.66□□□□□ -0.54
SEC13-201ENST00000337354 CRYBB3P26998 211 aa11.66□□□□□ -0.54
SEC13-201ENST00000337354 DEFA6Q01524 100 aa11.66□□□□□ -0.54
SEC13-201ENST00000337354 EGFEM1PQ0D2K5 195 aa11.66□□□□□ -0.54
SEC13-201ENST00000337354 DEFB114Q30KQ6 69 aa11.66□□□□□ -0.54
SEC13-201ENST00000337354 KPRPQ5T749 579 aaPredicted RBP11.66□□□□□ -0.54
SEC13-201ENST00000337354 DYNLRB2Q8TF09 96 aa11.66□□□□□ -0.54
SEC13-201ENST00000337354 RNF125Q96EQ8 232 aa11.66□□□□□ -0.54
SEC13-201ENST00000337354 NARS2Q96I59 477 aaKnown RBP11.66□□□□□ -0.54
SEC13-201ENST00000337354 IGHV3OR16-8A0A075B7F1 116 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 FXYD6-FXYD2A0A087WZ82 144 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 G3V3Q6 166 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 AGPAT2O15120 278 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 ZNF207O43670 478 aaKnown RBP11.65□□□□□ -0.55
SEC13-201ENST00000337354 S100A7P31151 101 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 CAMLGP49069 296 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 BTNL8Q6UX41 500 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 ATP5SQ99766 215 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 RHPN1-AS1Q9BWJ2 59 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 TMEM231Q9H6L2 316 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 RABAC1Q9UI14 185 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 SLC45A2Q9UMX9 530 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 TNFSF18Q9UNG2 199 aa11.65□□□□□ -0.55
SEC13-201ENST00000337354 CHEK1O14757 476 aa11.64□□□□□ -0.55
SEC13-201ENST00000337354 HNRNPCP07910 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
SEC13-201ENST00000337354 OR2F1Q13607 317 aa11.64□□□□□ -0.55
SEC13-201ENST00000337354 CLINT1Q14677 625 aa11.64□□□□□ -0.55
SEC13-201ENST00000337354 USF2Q15853 346 aaPredicted RBP11.64□□□□□ -0.55
SEC13-201ENST00000337354 BEAN1Q3B7T3 259 aa11.64□□□□□ -0.55
SEC13-201ENST00000337354 PXDC1Q5TGL8 231 aa11.64□□□□□ -0.55
SEC13-201ENST00000337354 LAMTOR1Q6IAA8 161 aa11.64□□□□□ -0.55
SEC13-201ENST00000337354 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
SEC13-201ENST00000337354 MGST2Q99735 147 aa11.64□□□□□ -0.55
SEC13-201ENST00000337354 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 UBE2L5PA0A1B0GUS4 154 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 IFNA5P01569 189 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 EDN2P20800 178 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 RPL29P47914 159 aaKnown RBP11.63□□□□□ -0.55
SEC13-201ENST00000337354 EIF2B2P49770 351 aaKnown RBP11.63□□□□□ -0.55
SEC13-201ENST00000337354 PLP1P60201 277 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 LCN12Q6JVE5 192 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 TMEM182Q6ZP80 229 aaPredicted RBP11.63□□□□□ -0.55
SEC13-201ENST00000337354 TCTE3Q8IZS6 198 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 GRAMD2BQ96HH9 432 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 ST6GAL2Q96JF0 529 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 PBDC1Q9BVG4 233 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
SEC13-201ENST00000337354 VSIRQ9H7M9 311 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 MLXQ9UH92 298 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 U3KQE9 123 aa11.63□□□□□ -0.55
SEC13-201ENST00000337354 hCG_2014768A0A024R1R8 64 aa11.62□□□□□ -0.55
SEC13-201ENST00000337354 HMSDA8MTL9 139 aa11.62□□□□□ -0.55
SEC13-201ENST00000337354 FGF7P21781 194 aa11.62□□□□□ -0.55
SEC13-201ENST00000337354 GATA2P23769 480 aaPredicted RBP11.62□□□□□ -0.55
SEC13-201ENST00000337354 AP2S1P53680 142 aaPredicted RBP11.62□□□□□ -0.55
SEC13-201ENST00000337354 LYZP61626 148 aa11.62□□□□□ -0.55
SEC13-201ENST00000337354 CD300EQ496F6 205 aaPredicted RBP11.62□□□□□ -0.55
SEC13-201ENST00000337354 Q6ZRG5 221 aa11.62□□□□□ -0.55
SEC13-201ENST00000337354 RBPMS2Q6ZRY4 209 aaKnown RBP11.62□□□□□ -0.55
SEC13-201ENST00000337354 SCGB1C1Q8TD33 95 aa11.62□□□□□ -0.55
SEC13-201ENST00000337354 NEURL2Q9BR09 285 aa11.62□□□□□ -0.55
SEC13-201ENST00000337354 PARD6GQ9BYG4 376 aaPredicted RBP11.62□□□□□ -0.55
SEC13-201ENST00000337354 NOTCH1P46531 2555 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 BUB3O43684 328 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 LINC00869P0C866 280 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 ORM2P19652 201 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 PRR20EP86478 221 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 PRR20CP86479 221 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 PRR20DP86480 221 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 PRR20BP86481 221 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 PRR20AP86496 221 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 ZNF266Q14584 549 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 AKAP14Q86UN6 197 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 ZNF709Q8N972 641 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 SMIM3Q9BZL3 60 aa11.61□□□□□ -0.55
SEC13-201ENST00000337354 RNF24Q9Y225 148 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms