RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 EPDR1Q9UM22 224 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 KIAA1671Q9BY89 1806 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 LAMA2P24043 3122 aaKnown RBP10.94□□□□□ -0.66
COL2A1-201ENST00000337299 ANAPC1Q9H1A4 1944 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 IGKV3-7A0A075B6H7 116 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 NKX2-8O15522 239 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 RPL27AP46776 148 aaKnown RBP10.94□□□□□ -0.66
COL2A1-201ENST00000337299 LOXL3P58215 753 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 PSG7Q13046 419 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 GAGE13Q4V321 117 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 COL4A3Q01955 1670 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 TRBV20OR9-2A0A075B6H5 130 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 TMEM238LA0A1B0GVL6 79 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 A6NJY4 79 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 MLNRO43193 412 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 NDUFA3O95167 84 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 IGLV3-19P01714 112 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 EMP1P54849 157 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 MEF2CQ06413 473 aaPredicted RBP10.94□□□□□ -0.66
COL2A1-201ENST00000337299 ITLN1Q8WWA0 313 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 IFI27L1Q96BM0 104 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 PCNX3Q9H6A9 2034 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 PIEZO2Q9H5I5 2752 aa10.94□□□□□ -0.66
COL2A1-201ENST00000337299 MED13Q9UHV7 2174 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 TICRRQ7Z2Z1 1910 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 ZNF714Q96N38 554 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 SCNM1Q9BWG6 230 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 TTTY12Q9BZ98 90 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 TRAV17A0A0B4J275 112 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 PRR19A6NJB7 356 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 FOXI3A8MTJ6 420 aaPredicted RBP10.93□□□□□ -0.66
COL2A1-201ENST00000337299 NCR2O95944 276 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 FAM71F2Q6NXP2 309 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 GTSCR1Q86UQ5 136 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 TEX45Q8NA69 505 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 Q9H3A6 140 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 CHODLQ9H9P2 273 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 SLC25A10Q9UBX3 287 aaPredicted RBP10.93□□□□□ -0.66
COL2A1-201ENST00000337299 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 DLX1P56177 255 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 ACP7Q6ZNF0 438 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 ORMDL3Q8N138 153 aa10.93□□□□□ -0.66
COL2A1-201ENST00000337299 CIARTQ8N365 385 aaPredicted RBP10.93□□□□□ -0.66
COL2A1-201ENST00000337299 PRRG2O14669 202 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 GFRA3O60609 400 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 RAB9AP51151 201 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 YLPM1P49750 1951 aaKnown RBP10.92□□□□□ -0.66
COL2A1-201ENST00000337299 SP9P0CG40 484 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 COX6A1P12074 109 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 FAM168AQ92567 244 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 RNF7Q9UBF6 113 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 LAMA3Q16787 3333 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 PRR14LQ5THK1 2151 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 YPEL1O60688 119 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 SNCGO76070 127 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 C10orf55Q5SWW7 151 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 YPEL2Q96QA6 119 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 IGHV3OR16-8A0A075B7F1 116 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 C15orf61A6NNL5 157 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 NDUFB8O95169 186 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 LINC00173Q6ZV60 143 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 COQ2Q96H96 371 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 THADAQ6YHU6 1953 aa10.92□□□□□ -0.66
COL2A1-201ENST00000337299 HBDP02042 147 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 ASCL4Q6XD76 172 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 NEUROG1Q92886 237 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 PRSS2P07478 247 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 INSIG2Q9Y5U4 225 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 DYSFO75923 2080 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 TRGV8A0A0C4DH27 118 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 EVI2AP22794 236 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 PPIFP30405 207 aaKnown RBP10.91□□□□□ -0.66
COL2A1-201ENST00000337299 LEPP41159 167 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 TNFRSF14Q92956 283 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 SRSF8Q9BRL6 282 aaKnown RBP10.91□□□□□ -0.66
COL2A1-201ENST00000337299 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
COL2A1-201ENST00000337299 TNFRSF1AP19438 455 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 HERVK_113P61574 105 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 RBPJQ06330 500 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 GEMIN7Q9H840 131 aaKnown RBP10.9□□□□□ -0.66
COL2A1-201ENST00000337299 TRAV8-2A0A0B4J237 113 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 SPINK8P0C7L1 97 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 OR4A5Q8NH83 315 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 C9orf118A6NHY6 69 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 DEFB125Q8N687 156 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 TEX29Q8N6K0 151 aa10.9□□□□□ -0.66
COL2A1-201ENST00000337299 SAA2-SAA4A0A096LPE2 208 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 IGHV1-24A0A0C4DH33 117 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 D6R8Y8 96 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 MMP23AO75900 390 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 SAA2P0DJI9 122 aaPredicted RBP10.89□□□□□ -0.67
COL2A1-201ENST00000337299 DTX1Q86Y01 620 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 OR9G4Q8NGQ1 327 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 LY96Q9Y6Y9 160 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 IGHV3OR16-13A0A075B7E8 117 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 IGHV3-74A0A0B4J1X5 117 aa10.89□□□□□ -0.67
COL2A1-201ENST00000337299 WNT2P09544 360 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms