RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 NDPQ00604 133 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 VMO1Q7Z5L0 202 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 FXYD5Q96DB9 178 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
SNCA-201ENST00000336904 TMEM167BQ9NRX6 74 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 SELENOKQ9Y6D0 94 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 ABCA2Q9BZC7 2435 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 A0A087X0M5 115 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 A0A1B0GX30 115 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 FAM120AOSQ5T036 256 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 IGFL4Q6B9Z1 124 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 SSBP4Q9BWG4 385 aaPredicted RBP7.03□□□□□ -1.28
SNCA-201ENST00000336904 PRDM13Q9H4Q3 707 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 CBLN4Q9NTU7 201 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 ZNF462Q96JM2 2506 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 GPR6P46095 362 aaPredicted RBP7.03□□□□□ -1.28
SNCA-201ENST00000336904 LGALS7P47929 136 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 ZNF137PP52743 207 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 RPEL1Q2QD12 228 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 TMEM30BQ3MIR4 351 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 FAM209BQ5JX69 171 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 IBA57Q5T440 356 aaKnown RBP7.03□□□□□ -1.28
SNCA-201ENST00000336904 TPTE2P1Q5T6R2 138 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 ZNF329Q86UD4 541 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 TIMD4Q96H15 378 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 IL36BQ9NZH7 164 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 LINC00527Q9UJ94 153 aa7.03□□□□□ -1.28
SNCA-201ENST00000336904 IGHV3OR16-13A0A075B7E8 117 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 IGHV3-74A0A0B4J1X5 117 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 GZMBP10144 247 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 CAMPP49913 170 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 LINC00322Q6ZN03 302 aaPredicted RBP7.02□□□□□ -1.29
SNCA-201ENST00000336904 ZNF596Q8TC21 504 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 CACNG8Q8WXS5 425 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 SOX21Q9Y651 276 aaPredicted RBP7.02□□□□□ -1.29
SNCA-201ENST00000336904 EPG5Q9HCE0 2579 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 FSTL3O95633 263 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 CRYGBP07316 175 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 HIST1H1BP16401 226 aaKnown RBP7.02□□□□□ -1.29
SNCA-201ENST00000336904 GPX4P36969 197 aaPredicted RBP7.02□□□□□ -1.29
SNCA-201ENST00000336904 BPIFB3P59826 476 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 BAGE2Q86Y30 109 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 RNASEH2CQ8TDP1 164 aaKnown RBP7.02□□□□□ -1.29
SNCA-201ENST00000336904 C11orf52Q96A22 123 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 TP53TG3Q9ULZ0 132 aa7.02□□□□□ -1.29
SNCA-201ENST00000336904 F11RQ9Y624 299 aaKnown RBP7.02□□□□□ -1.29
SNCA-201ENST00000336904 ELOA3CA0A087WX78 387 aaPredicted RBP7.01□□□□□ -1.29
SNCA-201ENST00000336904 PEX7O00628 323 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 TMEM249Q2WGJ8 235 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 TEX45Q8NA69 505 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 NRGNQ92686 78 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 IGF2BP2-AS1Q96M15 143 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 RBM14Q96PK6 669 aaKnown RBP7.01□□□□□ -1.29
SNCA-201ENST00000336904 BPESC1Q9GZL8 116 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 DPM3Q9P2X0 92 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 SERF1AO75920 110 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 SCGB1D1O95968 90 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 NBEAP1P0C6P0 100 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 UCNP55089 124 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 IQCJQ1A5X6 159 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 C11orf71Q6IPW1 123 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 TCF24Q7RTU0 167 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 OR4A5Q8NH83 315 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 RNF114Q9Y508 228 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 DOPEY2Q9Y3R5 2298 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 IGHV3-66A0A0C4DH42 116 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 HYPMO75409 117 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 LINC00310P59036 64 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 FBXL19-AS1Q494R0 122 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 ZNF600Q6ZNG1 722 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 RCHY1Q96PM5 261 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 RASL11BQ9BPW5 248 aa7.01□□□□□ -1.29
SNCA-201ENST00000336904 TLN2Q9Y4G6 2542 aa7□□□□□ -1.29
SNCA-201ENST00000336904 IGHV3-49A0A0A0MS15 119 aa7□□□□□ -1.29
SNCA-201ENST00000336904 MUC21A0A0G2JKD1 596 aa7□□□□□ -1.29
SNCA-201ENST00000336904 MUC21A0A140T8X8 626 aa7□□□□□ -1.29
SNCA-201ENST00000336904 LINC01548A6NM66 108 aa7□□□□□ -1.29
SNCA-201ENST00000336904 LY6LH3BQJ8 138 aa7□□□□□ -1.29
SNCA-201ENST00000336904 M0R3E3 92 aa7□□□□□ -1.29
SNCA-201ENST00000336904 NBR2O15453 112 aa7□□□□□ -1.29
SNCA-201ENST00000336904 OR2J3O76001 311 aa7□□□□□ -1.29
SNCA-201ENST00000336904 IL4P05112 153 aa7□□□□□ -1.29
SNCA-201ENST00000336904 IGLC1P0CG04 106 aa7□□□□□ -1.29
SNCA-201ENST00000336904 UBE2G1P62253 170 aa7□□□□□ -1.29
SNCA-201ENST00000336904 FOXL1Q12952 345 aa7□□□□□ -1.29
SNCA-201ENST00000336904 ECSCRQ19T08 205 aa7□□□□□ -1.29
SNCA-201ENST00000336904 MUC21Q5SSG8 566 aa7□□□□□ -1.29
SNCA-201ENST00000336904 TMEM219Q86XT9 240 aa7□□□□□ -1.29
SNCA-201ENST00000336904 BAGE3Q86Y29 109 aa7□□□□□ -1.29
SNCA-201ENST00000336904 CIARTQ8N365 385 aaPredicted RBP7□□□□□ -1.29
SNCA-201ENST00000336904 BEND2Q8NDZ0 799 aa7□□□□□ -1.29
SNCA-201ENST00000336904 C22orf15Q8WYQ4 148 aa7□□□□□ -1.29
SNCA-201ENST00000336904 OR2T8A6NH00 312 aa7□□□□□ -1.29
SNCA-201ENST00000336904 M0QZ24 198 aa7□□□□□ -1.29
SNCA-201ENST00000336904 IGKV1-17P01599 117 aa7□□□□□ -1.29
SNCA-201ENST00000336904 CX3CL1P78423 397 aa7□□□□□ -1.29
SNCA-201ENST00000336904 RPL19P84098 196 aaKnown RBP7□□□□□ -1.29
SNCA-201ENST00000336904 TDRG1Q3Y452 100 aa7□□□□□ -1.29
SNCA-201ENST00000336904 FAM19A2Q8N3H0 131 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms