RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 RPUSD1Q9UJJ7 312 aaKnown RBP10.83□□□□□ -0.68
HLCS-201ENST00000336648 MYO16Q9Y6X6 1858 aa10.83□□□□□ -0.68
HLCS-201ENST00000336648 AMBPP02760 352 aa10.83□□□□□ -0.68
HLCS-201ENST00000336648 ZNF625Q96I27 306 aaPredicted RBP10.83□□□□□ -0.68
HLCS-201ENST00000336648 TRGV9Q99603 122 aa10.83□□□□□ -0.68
HLCS-201ENST00000336648 IGKV1-9A0A0C4DH69 117 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 LYZL4Q96KX0 146 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 SLC25A39Q9BZJ4 359 aaPredicted RBP10.82□□□□□ -0.68
HLCS-201ENST00000336648 MCM3APO60318 1980 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 C9orf139Q6ZV77 190 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 TRAV41A0A0B4J266 112 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 J3QRE1 110 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 SOCS3O14543 225 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 NCR2O95944 276 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 CELA3BP08861 270 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 PYYP10082 97 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 TIMP3P35625 211 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 CHCHD5Q9BSY4 110 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 IFITM1P13164 125 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 CD33P20138 364 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 LYPD1Q8N2G4 141 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 C9JAW5 83 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 CRYGSP22914 178 aa10.82□□□□□ -0.68
HLCS-201ENST00000336648 CD5LO43866 347 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 MBNL3Q9NUK0 354 aaKnown RBP10.81□□□□□ -0.68
HLCS-201ENST00000336648 TIMM23O14925 209 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 LYPD3O95274 346 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 ZNF837Q96EG3 531 aaPredicted RBP10.81□□□□□ -0.68
HLCS-201ENST00000336648 CRIM1Q9NZV1 1036 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 TDRD15B5MCY1 1934 aaKnown RBP10.81□□□□□ -0.68
HLCS-201ENST00000336648 SRRM5B3KS81 715 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 RSPO4Q2I0M5 234 aaPredicted RBP10.81□□□□□ -0.68
HLCS-201ENST00000336648 TREML4Q6UXN2 200 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 A0A087X0K7 114 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 IGHV1-18A0A0C4DH31 117 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 RAMP3O60896 148 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 LINC00477Q96M19 166 aa10.81□□□□□ -0.68
HLCS-201ENST00000336648 A0A1B0GWJ7 208 aa10.8□□□□□ -0.68
HLCS-201ENST00000336648 H0YIZ8 118 aa10.8□□□□□ -0.68
HLCS-201ENST00000336648 RPL36AP83881 106 aaKnown RBP10.8□□□□□ -0.68
HLCS-201ENST00000336648 RPL36ALQ969Q0 106 aaKnown RBP10.8□□□□□ -0.68
HLCS-201ENST00000336648 AGMATQ9BSE5 352 aa10.8□□□□□ -0.68
HLCS-201ENST00000336648 ANKRD31Q8N7Z5 1873 aa10.8□□□□□ -0.68
HLCS-201ENST00000336648 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.8□□□□□ -0.68
HLCS-201ENST00000336648 TPRP12270 2363 aaKnown RBP10.8□□□□□ -0.68
HLCS-201ENST00000336648 TCTEX1D4Q5JR98 221 aa10.8□□□□□ -0.68
HLCS-201ENST00000336648 LHFPL1Q86WI0 220 aa10.8□□□□□ -0.68
HLCS-201ENST00000336648 NDUFC2O95298 119 aa10.8□□□□□ -0.68
HLCS-201ENST00000336648 VCYO14598 125 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 RPRMLQ8N4K4 120 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 TRBV7-1A0A0A6YYK4 115 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 PSG3Q16557 428 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 TRBV20-1A0A075B6N2 111 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 IGHV1-46P01743 117 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 MPV17L2Q567V2 206 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 TEX43Q6ZNM6 134 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 IGHV3OR16-8A0A075B7F1 116 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 FNDC10F2Z333 226 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 PAQR4Q8N4S7 273 aaPredicted RBP10.79□□□□□ -0.68
HLCS-201ENST00000336648 SRSF8Q9BRL6 282 aaKnown RBP10.79□□□□□ -0.68
HLCS-201ENST00000336648 TMEM126AQ9H061 195 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 MYMXA0A1B0GTQ4 84 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 CDKN1AP38936 164 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 PMVKQ15126 192 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 UTF1Q5T230 341 aa10.79□□□□□ -0.68
HLCS-201ENST00000336648 MRPL27Q9P0M9 148 aaKnown RBP10.79□□□□□ -0.68
HLCS-201ENST00000336648 ZNF138P52744 262 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 ZFP36L1Q07352 338 aaKnown RBP10.78□□□□□ -0.68
HLCS-201ENST00000336648 ACTL10Q5JWF8 245 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 C20orf204Q6ZNR8 217 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 GLMPQ8WWB7 406 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 LTBP4Q8N2S1 1624 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 SELLP14151 372 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 C1QTNF4Q9BXJ3 329 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 WFDC1Q9HC57 220 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 THSD7AQ9UPZ6 1657 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 A0A087WX48 190 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 CD55P08174 381 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
HLCS-201ENST00000336648 USMG5Q96IX5 58 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 ATP6V0BQ99437 205 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 A0A1W2PRX2 142 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 hDV102S1A0JD36 115 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 M0R1W7 72 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 IGHV2-26A0A0B4J1V2 119 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 TMEM8BA6NDV4 472 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 EFNA4P52798 201 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 RCHY1Q96PM5 261 aa10.78□□□□□ -0.68
HLCS-201ENST00000336648 TCRAP04437 139 aa10.77□□□□□ -0.69
HLCS-201ENST00000336648 CHAC1Q9BUX1 264 aa10.77□□□□□ -0.69
HLCS-201ENST00000336648 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.77□□□□□ -0.69
HLCS-201ENST00000336648 UBL5Q9BZL1 73 aa10.77□□□□□ -0.69
HLCS-201ENST00000336648 DEPPQ9NTK1 212 aa10.77□□□□□ -0.69
HLCS-201ENST00000336648 NPIPB5A8MRT5 1133 aa10.77□□□□□ -0.69
HLCS-201ENST00000336648 UNC13CQ8NB66 2214 aa10.77□□□□□ -0.69
HLCS-201ENST00000336648 TMEM14EPQ6UXP3 125 aa10.77□□□□□ -0.69
HLCS-201ENST00000336648 RGPD3A6NKT7 1758 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms