RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 IGHV3OR16-10A0A075B7F0 116 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 LOC102723971A0A1B0GUV8 181 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 A8MXK9 166 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 GGCTO75223 188 aaKnown RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 DUSP14O95147 198 aaKnown RBP5.57□□□□□ -1.52
SF3B1-201ENST00000335508 PDE6HQ13956 83 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 C12orf54Q6X4T0 127 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 TMEM116Q8NCL8 245 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 PARLQ9H300 379 aa5.57□□□□□ -1.52
SF3B1-201ENST00000335508 IGHV3-35A0A0C4DH35 117 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 K7ERU9 68 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 WISP2O76076 250 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 CRISP2P16562 243 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 RFNGQ9Y644 331 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 IGKV3-7A0A075B6H7 116 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 A0A1B0GUS0 222 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 WIPF3A6NGB9 483 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 C15orf62A8K5M9 175 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 IGHV4-39P01824 125 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 PF4P02776 101 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 TFF1P04155 84 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 ARL14EPLP0DKL9 152 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 IBA57Q5T440 356 aaKnown RBP5.56□□□□□ -1.52
SF3B1-201ENST00000335508 NUDT10Q8NFP7 164 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 FAM110DQ8TAY7 271 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-201ENST00000335508 TRAV9-1A0A075B6T8 112 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 RNF223E7ERA6 249 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 TMEM50AO95807 157 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 PPP1R17O96001 155 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 REG1AP05451 166 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 TRGC1P0CF51 173 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 CRYBB3P26998 211 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF137PP52743 207 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 PTTG1IPP53801 180 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 PAX8Q06710 450 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 DMRTA1Q5VZB9 504 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF581Q9P0T4 197 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 CDC42EP3Q9UKI2 254 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 RNF114Q9Y508 228 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 A0A087X0M5 115 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 A0A1B0GX30 115 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 NDUFS7O75251 213 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 VDAC2P45880 294 aaPredicted RBP5.56□□□□□ -1.52
SF3B1-201ENST00000335508 CAMPP49913 170 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 TMEM249Q2WGJ8 235 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 GBGT1Q8N5D6 347 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 LIME1Q9H400 295 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 A0A1W2PPI3 338 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 GUCA2BQ16661 112 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 MSMPQ1L6U9 139 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 PRSS3P2Q8NHM4 247 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 ASCL2Q99929 193 aa5.56□□□□□ -1.52
SF3B1-201ENST00000335508 ICAM4Q14773 271 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF738Q8NE65 137 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 NDUFA4L2Q9NRX3 87 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 PGPEP1LA6NFU8 196 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 H3BUA1 57 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 SLC31A2O15432 143 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 GCGP01275 180 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 AMTP48728 403 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 BRD3OSQ6XYD6 125 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 LRRC75A-AS1Q8N1F1 130 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 AARDQ4LEZ3 155 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 KLHDC1Q8N7A1 406 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 OR4B1Q8NGF8 309 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 FGF23Q9GZV9 251 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-201ENST00000335508 TRBV7-1A0A0A6YYK4 115 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 PSMB11A5LHX3 300 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 INS-IGF2F8WCM5 200 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 IGHV3-48P01763 117 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 SRP19P09132 144 aaKnown RBP5.55□□□□□ -1.52
SF3B1-201ENST00000335508 CD24P25063 80 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 NDUFA6P56556 154 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 C1orf194Q5T5A4 169 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 SPANXN1Q5VSR9 72 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 GOLT1AQ6ZVE7 132 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 TUBA4BQ9H853 241 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 GOLT1BQ9Y3E0 138 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 PSG1P11464 419 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 DEFB113Q30KQ7 82 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 SIGLECL1Q8N7X8 197 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 LINC00052Q96N35 136 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 PCNX3Q9H6A9 2034 aa5.55□□□□□ -1.52
SF3B1-201ENST00000335508 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.54□□□□□ -1.52
SF3B1-201ENST00000335508 AREGP15514 252 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 OTORQ9NRC9 128 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 CHD3Q12873 2000 aaKnown RBP5.54□□□□□ -1.52
SF3B1-201ENST00000335508 IGHV4-61A0A0C4DH41 118 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 A0A0G2JRQ6 117 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 FAM223BA6NKX1 122 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 SLAQ13239 276 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 PSMG4Q5JS54 123 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 TCF24Q7RTU0 167 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 FAM223AQ8IWN6 122 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 KCNS1Q96KK3 526 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 TRAPPC1Q9Y5R8 145 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 PLXND1Q9Y4D7 1925 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 ZNF98A6NK75 572 aa5.54□□□□□ -1.52
SF3B1-201ENST00000335508 F5H697 171 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms