RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 WDR86Q86TI4 376 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 LEPROTL1O95214 131 aa12.25□□□□□ -0.45
C9orf47-201ENST00000334490 FOXA3P55318 350 aaPredicted RBP12.25□□□□□ -0.45
C9orf47-201ENST00000334490 H7C1H1 209 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 CR1LQ2VPA4 569 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 DUX4L9Q6RFH8 374 aaPredicted RBP12.24□□□□□ -0.45
C9orf47-201ENST00000334490 BEX4Q9NWD9 120 aaPredicted RBP12.24□□□□□ -0.45
C9orf47-201ENST00000334490 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 FABP5P3A8MUU1 101 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 ATG101Q9BSB4 218 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 TNFRSF18Q9Y5U5 241 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 IFITM10A6NMD0 228 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 PAX1P15863 534 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 SPSB3Q6PJ21 355 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 SDF2L1Q9HCN8 221 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 PAM16Q9Y3D7 125 aa12.24□□□□□ -0.45
C9orf47-201ENST00000334490 F11RQ9Y624 299 aaKnown RBP12.24□□□□□ -0.45
C9orf47-201ENST00000334490 A0A1B0GUT8 65 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 FAM71F2Q6NXP2 309 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 GTSCR1Q86UQ5 136 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 SPRY4Q9C004 299 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 LTBP2Q14767 1821 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 FBLL1A6NHQ2 334 aaKnown RBP12.23□□□□□ -0.45
C9orf47-201ENST00000334490 NMUP48645 174 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 RPL15P61313 204 aaKnown RBP12.23□□□□□ -0.45
C9orf47-201ENST00000334490 GGTLC1Q9BX51 225 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 CCDC168Q8NDH2 2452 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 A0A1W2PRE2 83 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 DKK1O94907 266 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 CD7P09564 240 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 CBLN1P23435 193 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 SIGLEC15Q6ZMC9 328 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 KLHL30-AS1Q8NEE0 82 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 WFDC1Q9HC57 220 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 TRAV5A0A0B4J249 113 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 IGHV1-69DA0A0B4J2H0 117 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 IGHV1-69P01742 117 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 LOXP28300 417 aaPredicted RBP12.23□□□□□ -0.45
C9orf47-201ENST00000334490 LCNL1Q6ZST4 164 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
C9orf47-201ENST00000334490 NDUFS7O75251 213 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 SOD3P08294 240 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 ASCL2Q99929 193 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 RPP21Q9H633 154 aaKnown RBP12.22□□□□□ -0.45
C9orf47-201ENST00000334490 PSMB2P49721 201 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 IGHV2-70DA0A0C4DH43 119 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 IGKV1-6A0A0C4DH72 117 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 M0R143 59 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 REC114Q7Z4M0 266 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 PMS2P5A8MQ11 134 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 FBLN7Q53RD9 439 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 Q71RC1 249 aaPredicted RBP12.22□□□□□ -0.45
C9orf47-201ENST00000334490 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
C9orf47-201ENST00000334490 PRB4P10163 310 aaPredicted RBP12.21□□□□□ -0.45
C9orf47-201ENST00000334490 TMEM136Q6ZRR5 245 aa12.21□□□□□ -0.45
C9orf47-201ENST00000334490 C3orf56Q8N813 242 aa12.21□□□□□ -0.45
C9orf47-201ENST00000334490 USMG5Q96IX5 58 aa12.21□□□□□ -0.45
C9orf47-201ENST00000334490 KCNS1Q96KK3 526 aa12.21□□□□□ -0.45
C9orf47-201ENST00000334490 DKK4Q9UBT3 224 aa12.21□□□□□ -0.45
C9orf47-201ENST00000334490 PSG8Q9UQ74 426 aa12.21□□□□□ -0.45
C9orf47-201ENST00000334490 ITGB1BP1O14713 200 aa12.21□□□□□ -0.46
C9orf47-201ENST00000334490 OR10AG1Q8NH19 301 aa12.21□□□□□ -0.46
C9orf47-201ENST00000334490 CCL20P78556 96 aa12.21□□□□□ -0.46
C9orf47-201ENST00000334490 TRBV7-1A0A0A6YYK4 115 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 TRBV9A0A0B4J1U6 114 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 ERVK11-1P61568 191 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 VSIRQ9H7M9 311 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 IL36BQ9NZH7 164 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 CFHR2P36980 270 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 C1orf147Q96MC9 270 aaPredicted RBP12.2□□□□□ -0.46
C9orf47-201ENST00000334490 SCRT1Q9BWW7 348 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 J3QR89 54 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 FOSL1P15407 271 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 HIVEP2P31629 2446 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 ZNF688P0C7X2 276 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 LEPP41159 167 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 NDPQ00604 133 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 PAPPA-AS1Q5QFB9 102 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 RNF138Q8WVD3 245 aa12.2□□□□□ -0.46
C9orf47-201ENST00000334490 ZNF562Q6V9R5 426 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 GEMIN7Q9H840 131 aaKnown RBP12.19□□□□□ -0.46
C9orf47-201ENST00000334490 TRAV21A0A0B4J279 112 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 TEX36Q5VZQ5 186 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 DMRTC2Q8IXT2 367 aaPredicted RBP12.19□□□□□ -0.46
C9orf47-201ENST00000334490 PRELID3AQ96N28 172 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 TRGV9Q99603 122 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 SLC25A39Q9BZJ4 359 aaPredicted RBP12.19□□□□□ -0.46
C9orf47-201ENST00000334490 SHISA9B4DS77 424 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 Q6ZRM9 215 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 REG4Q9BYZ8 158 aa12.19□□□□□ -0.46
C9orf47-201ENST00000334490 Q6AWC8 147 aa12.18□□□□□ -0.46
C9orf47-201ENST00000334490 OVOL1O14753 267 aa12.18□□□□□ -0.46
C9orf47-201ENST00000334490 RNASE7Q9H1E1 156 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms