RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ARFGEF1Q9Y6D6 1849 aa13.66□□□□□ -0.22
PTCH1-201ENST00000331920 TRACP01848 142 aa13.66□□□□□ -0.22
PTCH1-201ENST00000331920 A0A1W2PQF6 199 aa13.66□□□□□ -0.22
PTCH1-201ENST00000331920 DUTP33316 252 aaKnown RBP13.66□□□□□ -0.22
PTCH1-201ENST00000331920 TIMM21Q9BVV7 248 aa13.66□□□□□ -0.22
PTCH1-201ENST00000331920 IGLV1-36A0A0B4J1U3 117 aa13.65□□□□□ -0.22
PTCH1-201ENST00000331920 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-201ENST00000331920 TCF15Q12870 199 aa13.65□□□□□ -0.22
PTCH1-201ENST00000331920 LOC102723996A0A087X1L8 192 aa13.65□□□□□ -0.22
PTCH1-201ENST00000331920 CELA3AP09093 270 aa13.65□□□□□ -0.22
PTCH1-201ENST00000331920 EREGO14944 169 aa13.65□□□□□ -0.22
PTCH1-201ENST00000331920 RS1O15537 224 aa13.65□□□□□ -0.22
PTCH1-201ENST00000331920 WDR81Q562E7 1941 aa13.65□□□□□ -0.22
PTCH1-201ENST00000331920 PMS2P5A8MQ11 134 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 WNT2P09544 360 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 EGR2P11161 476 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-201ENST00000331920 PPBPP02775 128 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 CD5P06127 495 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 KLHL30-AS1Q8NEE0 82 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 PSG1P11464 419 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 IFITM3Q01628 133 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 LIMS1P48059 325 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 LILRA6Q6PI73 481 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 MCRIP2Q9BUT9 160 aaKnown RBP13.64□□□□□ -0.23
PTCH1-201ENST00000331920 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 PMVKQ15126 192 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 C3orf56Q8N813 242 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 GNB1LQ9BYB4 327 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 ALS2Q96Q42 1657 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 PPP1R32Q7Z5V6 425 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 TMEM170AQ8WVE7 144 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 ZNF319Q9P2F9 582 aa13.64□□□□□ -0.23
PTCH1-201ENST00000331920 FAM90A9PA6NNJ1 464 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 F5H768 121 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 SMKR1H3BMG3 65 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 TAL2Q16559 108 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 RASL11AQ6T310 242 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 SLC25A39Q9BZJ4 359 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-201ENST00000331920 C22orf46C9J442 243 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 CCL20P78556 96 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 RBM3P98179 157 aaKnown RBP13.63□□□□□ -0.23
PTCH1-201ENST00000331920 PVRIGQ6DKI7 326 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 TRAV9-1A0A075B6T8 112 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 MYMXA0A1B0GTQ4 84 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 SELLP14151 372 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-201ENST00000331920 PTPRFP10586 1907 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 NOTCH3Q9UM47 2321 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 IGHV2OR16-5A0A0B4J2B6 119 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 MESP2Q0VG99 397 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 C14orf178Q8N769 122 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-201ENST00000331920 FOXD3Q9UJU5 478 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-201ENST00000331920 PLCE1Q9P212 2302 aa13.63□□□□□ -0.23
PTCH1-201ENST00000331920 OVOL1O14753 267 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 NABP1Q96AH0 204 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 LOC285556D6RIA3 1793 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 C15orf32Q32M92 178 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 OCC1Q8TAD7 63 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 NPDC1Q9NQX5 325 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-201ENST00000331920 IGHV3-16A0A0C4DH30 117 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 A0A0G2JK05 382 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 RFPL3SP0C7P2 107 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 KIR3DS1Q14943 382 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 LINC00312Q9Y6C7 94 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 QSER1Q2KHR3 1735 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 MORN5Q5VZ52 161 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 SPSB3Q6PJ21 355 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 CHAC1Q9BUX1 264 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 GREB1Q4ZG55 1949 aa13.62□□□□□ -0.23
PTCH1-201ENST00000331920 CACNA1GO43497 2377 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 INAFM2P0DMQ5 153 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 SLC25A45Q8N413 288 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 A0A087WWC5 75 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 TRBV5-7A0A0A0MS05 114 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 IGKV1-8A0A0C4DH67 115 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-201ENST00000331920 ITGBL1O95965 494 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-201ENST00000331920 RPUSD1Q9UJJ7 312 aaKnown RBP13.61□□□□□ -0.23
PTCH1-201ENST00000331920 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 LY6DQ14210 128 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 C1orf100Q5SVJ3 147 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 ZNF236Q9UL36 1845 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 A0A1W2PPI3 338 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 TIMM23O14925 209 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 CTSBP07858 339 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 CLPSL2Q6UWE3 100 aa13.61□□□□□ -0.23
PTCH1-201ENST00000331920 GAGE12JA6NER3 117 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 GAGE1Q13065 139 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 GAGE4Q13068 117 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 GAGE5Q13069 117 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 GAGE6Q13070 117 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 UBL5Q9BZL1 73 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 WFDC6Q9BQY6 131 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 TMEM258P61165 79 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 SRSF3P84103 164 aaKnown RBP13.6□□□□□ -0.23
PTCH1-201ENST00000331920 SCRT2Q9NQ03 307 aa13.6□□□□□ -0.23
PTCH1-201ENST00000331920 NEUROG3Q9Y4Z2 214 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms