RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CBLN1P23435 193 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 RPL23P62829 140 aaKnown RBP9.33□□□□□ -0.92
COL4A5-201ENST00000328300 JOSD1Q15040 202 aaPredicted RBP9.33□□□□□ -0.92
COL4A5-201ENST00000328300 C15orf32Q32M92 178 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 ORMDL3Q8N138 153 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 NEU1Q99519 415 aa9.33□□□□□ -0.92
COL4A5-201ENST00000328300 Q8NFD4 153 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 DMRTA2Q96SC8 542 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 H3BUX3 64 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 TFF1P04155 84 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 EMP1P54849 157 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 ZNF562Q6V9R5 426 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 LINC01587Q99440 93 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 NDUFB8O95169 186 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 GTSCR1Q86UQ5 136 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 SPRY4Q9C004 299 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 BPESC1Q9GZL8 116 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV3-35A0A0C4DH35 117 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 KLF2Q9Y5W3 355 aaPredicted RBP9.32□□□□□ -0.92
COL4A5-201ENST00000328300 PDE6HQ13956 83 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 WFDC1Q9HC57 220 aa9.32□□□□□ -0.92
COL4A5-201ENST00000328300 Q6ZSR3 168 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 C2orf88Q9BSF0 95 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 C7orf71A4D174 169 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 C1orf147Q96MC9 270 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-201ENST00000328300 H3BRM9 83 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-201ENST00000328300 CYTL1Q9NRR1 136 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV1-69DA0A0B4J2H0 117 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 LINC00473A8K010 186 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV1-69P01742 117 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 LINC00477Q96M19 166 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 AGMATQ9BSE5 352 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
COL4A5-201ENST00000328300 C1QTNF9P0C862 333 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 PRR30Q53SZ7 412 aaPredicted RBP9.31□□□□□ -0.92
COL4A5-201ENST00000328300 LYPD2Q6UXB3 125 aa9.31□□□□□ -0.92
COL4A5-201ENST00000328300 Q6ZR03 302 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 NIT1Q86X76 327 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 RNASE4P34096 147 aaKnown RBP9.3□□□□□ -0.92
COL4A5-201ENST00000328300 TSKUQ8WUA8 353 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 SLC25A39Q9BZJ4 359 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-201ENST00000328300 RNASE2P10153 161 aaKnown RBP9.3□□□□□ -0.92
COL4A5-201ENST00000328300 GATA2P23769 480 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-201ENST00000328300 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-201ENST00000328300 KRTAP27-1Q3LI81 207 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 TCF23Q7RTU1 214 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV3OR16-13A0A075B7E8 117 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV3-74A0A0B4J1X5 117 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 FAM74A4Q5TZK3 123 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 C14orf144Q96I85 54 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 C1QTNF4Q9BXJ3 329 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 S4R3C0 116 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 AMBPP02760 352 aa9.3□□□□□ -0.92
COL4A5-201ENST00000328300 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
COL4A5-201ENST00000328300 SPTA1P02549 2419 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 PSG1P11464 419 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 DKK4Q9UBT3 224 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 H3BUA1 57 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 SAA4P35542 130 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 KLRD1Q13241 179 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 DTX2Q86UW9 622 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 OR10W1Q8NGF6 305 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 OR5AN1Q8NGI8 311 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 PRSS2P07478 247 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 MGST2Q99735 147 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV3-66A0A0C4DH42 116 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 Q5PR19 223 aa9.29□□□□□ -0.92
COL4A5-201ENST00000328300 LOXP28300 417 aaPredicted RBP9.28□□□□□ -0.92
COL4A5-201ENST00000328300 M0R381 172 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 ZNF414Q96IQ9 312 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 RFNGQ9Y644 331 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 IGHV3-49A0A0A0MS15 119 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 ORMDL2Q53FV1 153 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 TMEM170AQ8WVE7 144 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 NDUFAF3Q9BU61 184 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 TMEM14BQ9NUH8 114 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 SRD5A1P18405 259 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 C15orf62A8K5M9 175 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 C1orf194Q5T5A4 169 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 NEUROG1Q92886 237 aa9.28□□□□□ -0.92
COL4A5-201ENST00000328300 ST20Q9HBF5 79 aa9.27□□□□□ -0.92
COL4A5-201ENST00000328300 NPIPB5A8MRT5 1133 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 HIGD1CA8MV81 97 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 NDUFS6O75380 124 aaKnown RBP9.27□□□□□ -0.93
COL4A5-201ENST00000328300 OR10J3Q5JRS4 329 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 POU2AF1Q16633 256 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 ZNF585BQ52M93 769 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 FANCMQ8IYD8 2048 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 OR11H12B2RN74 326 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 PYYP10082 97 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 OR11H1Q8NG94 326 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 OR11H2Q8NH07 326 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 TCRAP04437 139 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 FOXA3P55318 350 aaPredicted RBP9.27□□□□□ -0.93
COL4A5-201ENST00000328300 FOXL1Q12952 345 aa9.27□□□□□ -0.93
COL4A5-201ENST00000328300 CD24P25063 80 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 ZNF138P52744 262 aa9.26□□□□□ -0.93
COL4A5-201ENST00000328300 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms