RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 IGHV3OR16-10A0A075B7F0 116 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 A0A0U1RQK1 487 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 CTXND1A0A1B0GTU2 59 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 SLC25A17O43808 307 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 RBMXL2O75526 392 aaKnown RBP10.17□□□□□ -0.78
DDX39A-202ENST00000324340 NDUFA3O95167 84 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 CNTFRP26992 372 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 PTTG1IPP53801 180 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 UBE2G2P60604 165 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 HSPE1P61604 102 aaKnown RBP10.17□□□□□ -0.78
DDX39A-202ENST00000324340 RPL19P84098 196 aaKnown RBP10.17□□□□□ -0.78
DDX39A-202ENST00000324340 RUNX1Q01196 453 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 ZNF726P1Q15940 193 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 BRD3OSQ6XYD6 125 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 SIGLEC9Q9Y336 463 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 TEX15Q9BXT5 2789 aa10.17□□□□□ -0.78
DDX39A-202ENST00000324340 NBR2O15453 112 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 CST7O76096 145 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 FAM106CPP0CH98 169 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 RPL8P62917 257 aaKnown RBP10.16□□□□□ -0.78
DDX39A-202ENST00000324340 PRSS8Q16651 343 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 FBLN7Q53RD9 439 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 OR8G2PQ6IF36 304 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 PET117Q6UWS5 81 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 C9orf139Q6ZV77 190 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 SVIPQ8NHG7 77 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 CIB3Q96Q77 187 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-202ENST00000324340 ZNF430Q9H8G1 570 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-202ENST00000324340 SLC39A9Q9NUM3 307 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 TCF19Q9Y242 345 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 OR51B2Q9Y5P1 312 aa10.16□□□□□ -0.78
DDX39A-202ENST00000324340 NBPF19A0A087WUL8 3843 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 TEX50A0A1B0GTY4 177 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 INS-IGF2F8WCM5 200 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 RRHO14718 337 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 PDE6DO43924 150 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 CTRLP40313 264 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 VDAC2P45880 294 aaPredicted RBP10.15□□□□□ -0.78
DDX39A-202ENST00000324340 RPP30P78346 268 aaKnown RBP10.15□□□□□ -0.78
DDX39A-202ENST00000324340 PRCDQ00LT1 54 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 KRTAP1-1Q07627 177 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 LCN15Q6UWW0 184 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 PPP1R27Q86WC6 154 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 MMD2Q8IY49 270 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 ZNF738Q8NE65 137 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 OR5AU1Q8NGC0 362 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 ZDHHC16Q969W1 377 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 PARLQ9H300 379 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 TPSG1Q9NRR2 321 aa10.15□□□□□ -0.78
DDX39A-202ENST00000324340 TET2Q6N021 2002 aaPredicted RBP10.15□□□□□ -0.79
DDX39A-202ENST00000324340 TMEM11P17152 192 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 MDKP21741 143 aaPredicted RBP10.14□□□□□ -0.79
DDX39A-202ENST00000324340 CD24P25063 80 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 HES1Q14469 280 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 MMDQ15546 238 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 FAM120AOSQ5T036 256 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 PIFOQ8TCI5 191 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 COMMD5Q9GZQ3 224 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 WDR61Q9GZS3 305 aaKnown RBP10.14□□□□□ -0.79
DDX39A-202ENST00000324340 NDUFA4L2Q9NRX3 87 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 ZNF586Q9NXT0 402 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 PSENENQ9NZ42 101 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 CGB1A6NKQ9 187 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 SMAD7O15105 426 aaKnown RBP10.14□□□□□ -0.79
DDX39A-202ENST00000324340 CD5LO43866 347 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 CIDEAO60543 219 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 IAPPP10997 89 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 MYOD1P15172 320 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 HNF1AP20823 631 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 Q6ZWC4 215 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 TEX29Q8N6K0 151 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 OR5T1Q8NG75 326 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 OR1L8Q8NGR8 309 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 FBXL15Q9H469 300 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 MRPL27Q9P0M9 148 aaKnown RBP10.14□□□□□ -0.79
DDX39A-202ENST00000324340 LAMTOR2Q9Y2Q5 125 aa10.14□□□□□ -0.79
DDX39A-202ENST00000324340 TRAV30A0A087WSZ9 112 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 ZNF320A2RRD8 509 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 HSBP1L1C9JCN9 74 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 MT-ND6P03923 174 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 COMPP49747 757 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-202ENST00000324340 SSBP2P81877 361 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-202ENST00000324340 C5orf64Q2M2E5 130 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 SPINK9Q5DT21 86 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 TMEM217Q8N7C4 229 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 RNASE8Q8TDE3 154 aaKnown RBP10.13□□□□□ -0.79
DDX39A-202ENST00000324340 TAF15Q92804 592 aaKnown RBP eCLIP10.13□□□□□ -0.79
DDX39A-202ENST00000324340 PLEKHA3Q9HB20 300 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 C1RLQ9NZP8 487 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 SOX21Q9Y651 276 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-202ENST00000324340 COX11Q9Y6N1 276 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 LY96Q9Y6Y9 160 aa10.13□□□□□ -0.79
DDX39A-202ENST00000324340 NOTCH2Q04721 2471 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 PMS2P5A8MQ11 134 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 E7EUB6 86 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 H3BP45 60 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 FCN1O00602 326 aa10.12□□□□□ -0.79
DDX39A-202ENST00000324340 CCL25O15444 150 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms