RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 CDCP2Q5VXM1 449 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 LOC101059948A0A1B0GTJ6 334 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 IQCF6A8MYZ5 107 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 LINC00271P0C7V0 271 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 NPC2P61916 151 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 TFF2Q03403 129 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 A0A1B0GTI1 187 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 INS-IGF2F8WCM5 200 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 INSP01308 110 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 ZNF497Q6ZNH5 498 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 FAM166AQ6J272 317 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 GAGE2AQ6NT46 116 aa10.14□□□□□ -0.79
FARP1-201ENST00000319562 CECR9P0C854 216 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 COLCA1Q6ZS62 124 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 VCYO14598 125 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 MLNRO43193 412 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 BSPH1Q075Z2 132 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 IGHV3OR16-8A0A075B7F1 116 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 CD5P06127 495 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 KIR3DS1Q14943 382 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 PRSS22Q9GZN4 317 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 ANAPC10Q9UM13 185 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 D6R8Y8 96 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 RAMP3O60896 148 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 FOXL2P58012 376 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 PRCDQ00LT1 54 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 GTF3AQ92664 365 aaKnown RBP10.13□□□□□ -0.79
FARP1-201ENST00000319562 A0A1B0GW64 132 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 CD55P08174 381 aa10.13□□□□□ -0.79
FARP1-201ENST00000319562 NYNRINQ9P2P1 1898 aaKnown RBP10.13□□□□□ -0.79
FARP1-201ENST00000319562 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 H3BMM0 161 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 PAX8Q06710 450 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 ZNF415Q09FC8 603 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 MORN2Q502X0 79 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 NPIPB5A8MRT5 1133 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 LHX2P50458 406 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 C7orf69Q9H7B7 122 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 DYSFO75923 2080 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 INAFM2P0DMQ5 153 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 EML6Q6ZMW3 1958 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 A0A087X0K7 114 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 PYYP10082 97 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 OR9G9P0C7N8 305 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 SRSF3P84103 164 aaKnown RBP10.12□□□□□ -0.79
FARP1-201ENST00000319562 ADAMTSL1Q8N6G6 1762 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 ERCC8Q13216 396 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 ACTL10Q5JWF8 245 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 CHAC1Q9BUX1 264 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 SLC25A39Q9BZJ4 359 aaPredicted RBP10.12□□□□□ -0.79
FARP1-201ENST00000319562 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
FARP1-201ENST00000319562 PPIFP30405 207 aaKnown RBP10.12□□□□□ -0.79
FARP1-201ENST00000319562 IGHV2OR16-5A0A0B4J2B6 119 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 FGF16O43320 207 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 IGFBP3P17936 291 aaPredicted RBP10.11□□□□□ -0.79
FARP1-201ENST00000319562 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 NEUROG3Q9Y4Z2 214 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.11□□□□□ -0.79
FARP1-201ENST00000319562 A0A1W2PRX2 142 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 IGHV3-11P01762 117 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 DEPPQ9NTK1 212 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
FARP1-201ENST00000319562 C6orf226Q5I0X4 101 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 FAM216BQ8N7L0 139 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
FARP1-201ENST00000319562 TMEM133Q9H2Q1 129 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 TRAV1-1A0A0B4J248 108 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 C17orf100A8MU93 164 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 SLC25A45Q8N413 288 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 ADAMTSL3P82987 1691 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 SMAD7O15105 426 aaKnown RBP10.11□□□□□ -0.79
FARP1-201ENST00000319562 LILRA1O75019 489 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 CEACAM1P13688 526 aa10.11□□□□□ -0.79
FARP1-201ENST00000319562 MRPL27Q9P0M9 148 aaKnown RBP10.1□□□□□ -0.79
FARP1-201ENST00000319562 LINC01560Q8TB33 94 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 TRBV20-1A0A075B6N2 111 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 ADAMTSL5Q6ZMM2 481 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 RCHY1Q96PM5 261 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 PSG7Q13046 419 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 UBE2WQ96B02 151 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 MPZP25189 248 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 IGLV3-21P80748 117 aaPredicted RBP10.1□□□□□ -0.79
FARP1-201ENST00000319562 TNFRSF14Q92956 283 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 SYS1-DBNDD2H3BUS1 97 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 SRSF7Q16629 238 aaKnown RBP eCLIP10.1□□□□□ -0.792e-7■■■■□ 22.5
FARP1-201ENST00000319562 MRAPQ8TCY5 172 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 C1orf122Q6ZSJ8 110 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 IMMP1LQ96LU5 166 aa10.1□□□□□ -0.79
FARP1-201ENST00000319562 CD5LO43866 347 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 C9JAW5 83 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 SOCS3O14543 225 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 MRPS18CQ9Y3D5 142 aaKnown RBP10.09□□□□□ -0.79
FARP1-201ENST00000319562 SAP25Q8TEE9 199 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 ROS1P08922 2347 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 ZNF876PQ49A33 203 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 LOC285556D6RIA3 1793 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 PSG1P11464 419 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 AGMATQ9BSE5 352 aa10.09□□□□□ -0.79
FARP1-201ENST00000319562 TIMM21Q9BVV7 248 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms