RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 A0A1W2PNU3 283 aaPredicted RBP6.21□□□□□ -1.42
CDHR3-201ENST00000317716 FAM231BA6NCW3 169 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF503-AS2A6NEH8 195 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 NTN3O00634 580 aaPredicted RBP6.21□□□□□ -1.42
CDHR3-201ENST00000317716 TNFAIP6P98066 277 aaPredicted RBP6.21□□□□□ -1.42
CDHR3-201ENST00000317716 TWIST1Q15672 202 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 Q1RN00 199 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 C17orf82Q86X59 251 aaPredicted RBP6.21□□□□□ -1.42
CDHR3-201ENST00000317716 TMEM178AQ8NBL3 297 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 OSTCQ9NRP0 149 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 MED12LQ86YW9 2145 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 ITGB1BP1O14713 200 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 DNPH1O43598 174 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 DUTP33316 252 aaKnown RBP6.2□□□□□ -1.42
CDHR3-201ENST00000317716 VMA21Q3ZAQ7 101 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 OR10J3Q5JRS4 329 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 CLEC2AQ6UVW9 174 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 ZCCHC24Q8N2G6 241 aaKnown RBP6.2□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF418Q8TF45 676 aaPredicted RBP6.2□□□□□ -1.42
CDHR3-201ENST00000317716 TMEM160Q9NX00 188 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 PROCRQ9UNN8 238 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 ATMQ13315 3056 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 K7EMI3 77 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 NBEAP1P0C6P0 100 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 RPL7P18124 248 aaKnown RBP6.2□□□□□ -1.42
CDHR3-201ENST00000317716 YPEL3P61236 119 aaPredicted RBP6.2□□□□□ -1.42
CDHR3-201ENST00000317716 GUSBP1Q15486 140 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 PPP1R32Q7Z5V6 425 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 GGNQ86UU5 652 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 GRAMD2BQ96HH9 432 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 FGF23Q9GZV9 251 aaPredicted RBP6.2□□□□□ -1.42
CDHR3-201ENST00000317716 MGST3O14880 152 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 NCR2O95944 276 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 PPIFP30405 207 aaKnown RBP6.2□□□□□ -1.42
CDHR3-201ENST00000317716 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDHR3-201ENST00000317716 EBLN2Q6P2I7 272 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF788Q6ZQV5 615 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 FAM216BQ8N7L0 139 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF414Q96IQ9 312 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 AAMDCQ9H7C9 122 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 C2CD3Q4AC94 2353 aa6.2□□□□□ -1.42
CDHR3-201ENST00000317716 VSTM5A8MXK1 200 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 SYS1-DBNDD2H3BUS1 97 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 SCGB2A1O75556 95 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 LY6DQ14210 128 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 ACP7Q6ZNF0 438 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 CIARTQ8N365 385 aaPredicted RBP6.19□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF502Q8TBZ5 544 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 SSC4DQ8WTU2 575 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 HIST1H4GQ99525 98 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 JKAMPQ9P055 326 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 V9GYV3 84 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 A0A1B0GWB2 263 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 WNT2P09544 360 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 TIMM23BQ5SRD1 257 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 RPP21Q9H633 154 aaKnown RBP6.19□□□□□ -1.42
CDHR3-201ENST00000317716 SAA2-SAA4A0A096LPE2 208 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 A0A0G2JLM5 398 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 GGTLC3B5MD39 225 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 SAA2P0DJI9 122 aaPredicted RBP6.19□□□□□ -1.42
CDHR3-201ENST00000317716 Q0VG73 95 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 CRIP3Q6Q6R5 217 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 ZADH2Q8N4Q0 377 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 TMEM186Q96B77 213 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 IFI27L2Q9H2X8 130 aa6.19□□□□□ -1.42
CDHR3-201ENST00000317716 PPIAL4EA0A075B759 164 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF785A8K8V0 405 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 TM4SF5O14894 197 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 PPIAL4FP0DN26 164 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 PDLIM4P50479 330 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 CLDN18P56856 261 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 Q6P435 159 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 INO80CQ6PI98 192 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-201ENST00000317716 ASCL4Q6XD76 172 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 SPACA3Q8IXA5 215 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 COQ2Q96H96 371 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 IMMP1LQ96LU5 166 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 RASL11BQ9BPW5 248 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 NCBP2LA6PVI3 153 aaKnown RBP6.18□□□□□ -1.42
CDHR3-201ENST00000317716 SMKR1H3BMG3 65 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 MLNRO43193 412 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 NDUFB8O95169 186 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 SMIM13P0DJ93 91 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 KIR2DS2P43631 304 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 KIR3DS1Q14943 382 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF295-AS1Q8N0V1 137 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 EXOC3-AS1Q8N2X6 119 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 PNKDQ8N490 385 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 FDCSPQ8NFU4 85 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 CCL3L1P16619 93 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 WT1P19544 449 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-201ENST00000317716 FCGR2BP31994 310 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-201ENST00000317716 HIST1H1AQ02539 215 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-201ENST00000317716 C2orf83Q53S99 150 aa6.18□□□□□ -1.42
CDHR3-201ENST00000317716 IGHV3-49A0A0A0MS15 119 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 EVI2AP22794 236 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 S100A4P26447 101 aaKnown RBP6.17□□□□□ -1.42
CDHR3-201ENST00000317716 CDKN1BP46527 198 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 LOXL3P58215 753 aa6.17□□□□□ -1.42
CDHR3-201ENST00000317716 MORN2Q502X0 79 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms