RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FAM71F2Q6NXP2 309 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 SLC35E1Q96K37 410 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 CHODLQ9H9P2 273 aa9.94□□□□□ -0.82
RNF4-201ENST00000314289 IGLC7A0M8Q6 106 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 SPINK4O60575 86 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 FRMD6-AS1P0C7T7 363 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 FOXL1Q12952 345 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 MMDQ15546 238 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 OR10G8Q8NGN5 311 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 A0A1W2PN81 502 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
RNF4-201ENST00000314289 LGALS7P47929 136 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 OR5I1Q13606 314 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 TMEM183BQ1AE95 376 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 TPTE2P1Q5T6R2 138 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 PPP1R27Q86WC6 154 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 OCC1Q8TAD7 63 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 MIEN1Q9BRT3 115 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 SLC25A33Q9BSK2 321 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
RNF4-201ENST00000314289 KCNIP2Q9NS61 270 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 M0QZK8 103 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 SFTPCP11686 197 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 CD99P14209 185 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 IER3P46695 156 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 LINC00310P59036 64 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 S4R3C0 116 aa9.93□□□□□ -0.82
RNF4-201ENST00000314289 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.93□□□□□ -0.822e-7■■■■■ 29.5
RNF4-201ENST00000314289 USP9YO00507 2555 aaPredicted RBP9.92□□□□□ -0.82
RNF4-201ENST00000314289 HTR1DP28221 377 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 KRTDAPP60985 99 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 DYNAPQ8N1N2 210 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 LY6G5BQ8NDX9 201 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 NEU4Q8WWR8 484 aaPredicted RBP9.92□□□□□ -0.82
RNF4-201ENST00000314289 ZNF503Q96F45 646 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 BTF3L4Q96K17 158 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 CNIH1O95406 144 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 BRS3P32247 399 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 ASPHD1Q5U4P2 390 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 DMRTA1Q5VZB9 504 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 DTX2Q86UW9 622 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 OR5AU1Q8NGC0 362 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 OR1L6Q8NGR2 347 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 OR4A5Q8NH83 315 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 TNFRSF14Q92956 283 aa9.92□□□□□ -0.82
RNF4-201ENST00000314289 MMD2Q8IY49 270 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 C8orf46Q8TAG6 207 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 SNURFLB1AK76 121 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 LY6LH3BQJ8 138 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 OR5G3P0C626 314 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 PYYP10082 97 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 ORM2P19652 201 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 KLF17Q5JT82 389 aaPredicted RBP9.91□□□□□ -0.82
RNF4-201ENST00000314289 TEX43Q6ZNM6 134 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 VMO1Q7Z5L0 202 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 BPESC1Q9GZL8 116 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 RNF114Q9Y508 228 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 IGKV1D-37A0A075B6S9 117 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 PRB1P04280 392 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 PRB4P10163 310 aaPredicted RBP9.91□□□□□ -0.82
RNF4-201ENST00000314289 COMPP49747 757 aaPredicted RBP9.91□□□□□ -0.82
RNF4-201ENST00000314289 TEX45Q8NA69 505 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 SRSF12Q8WXF0 261 aaKnown RBP9.91□□□□□ -0.82
RNF4-201ENST00000314289 DPM3Q9P2X0 92 aa9.91□□□□□ -0.82
RNF4-201ENST00000314289 CRYGBP07316 175 aa9.9□□□□□ -0.82
RNF4-201ENST00000314289 SUB1P53999 127 aaKnown RBP eCLIP9.9□□□□□ -0.82
RNF4-201ENST00000314289 YPEL3P61236 119 aaPredicted RBP9.9□□□□□ -0.82
RNF4-201ENST00000314289 PAFAH1B2P68402 229 aa9.9□□□□□ -0.82
RNF4-201ENST00000314289 SLC35B1P78383 322 aa9.9□□□□□ -0.82
RNF4-201ENST00000314289 C20orf144Q9BQM9 153 aa9.9□□□□□ -0.82
RNF4-201ENST00000314289 ABCA2Q9BZC7 2435 aa9.9□□□□□ -0.83
RNF4-201ENST00000314289 RELQ04864 619 aaPredicted RBP9.9□□□□□ -0.83
RNF4-201ENST00000314289 KIAA1644Q3SXP7 199 aa9.9□□□□□ -0.83
RNF4-201ENST00000314289 LEMD1Q68G75 181 aa9.9□□□□□ -0.83
RNF4-201ENST00000314289 AMMECR1Q9Y4X0 333 aaPredicted RBP9.9□□□□□ -0.83
RNF4-201ENST00000314289 H3BTX0 84 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 K7EN84 100 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 CRYBB3P26998 211 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 PATE2Q6UY27 113 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 CACNG8Q8WXS5 425 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 FBXL7Q9UJT9 491 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 CSPG4Q6UVK1 2322 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 COX7A2P2O60397 106 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 MT-CO2P00403 227 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 PMCHP20382 165 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 RANP62826 216 aaKnown RBP9.89□□□□□ -0.83
RNF4-201ENST00000314289 SUMO1P63165 101 aaKnown RBP9.89□□□□□ -0.83
RNF4-201ENST00000314289 SIGLECL1Q8N7X8 197 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 OR1B1Q8NGR6 318 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 IL36BQ9NZH7 164 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 ZANQ9Y493 2812 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 ABCA12Q86UK0 2595 aa9.89□□□□□ -0.83
RNF4-201ENST00000314289 NCBP2LA6PVI3 153 aaKnown RBP9.88□□□□□ -0.83
RNF4-201ENST00000314289 TCF21O43680 179 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 OR8I2Q8N0Y5 310 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 DNAJC4Q9NNZ3 241 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 TNFRSF19Q9NS68 423 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 ZNF355PQ9NSJ1 428 aa9.88□□□□□ -0.83
RNF4-201ENST00000314289 TECRQ9NZ01 308 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms