RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CGB1A6NKQ9 187 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 HSBP1L1C9JCN9 74 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 MOSP00540 346 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 LTAP01374 205 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 IGLV2-23P01705 113 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 ORM2P19652 201 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 ZNF137PP52743 207 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 TMEM200BQ69YZ2 307 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 PVRIGQ6DKI7 326 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 BLNKQ8WV28 456 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 PLCE1Q9P212 2302 aa11.14□□□□□ -0.63
MKS1-201ENST00000313863 C19orf71A6NCJ1 209 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 E7EUB6 86 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 NDUFB3O43676 98 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 CEACAM4O75871 244 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 PAX2Q02962 417 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 MAJINQ3KP22 176 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 LRRC10Q5BKY1 277 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 ASCL5Q7RTU5 278 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 PPIAL4AQ9Y536 164 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 SVILO95425 2214 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 CELSR3Q9NYQ7 3312 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 CHEK1O14757 476 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 CCL25O15444 150 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 LEPROTL1O95214 131 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 LIPFP07098 398 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 CCL3L1P16619 93 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 PLP1P60201 277 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 DEFB109BQ30KR1 87 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 TMEM108Q6UXF1 575 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 ZNF841Q6ZN19 808 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 TCF24Q7RTU0 167 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 TEX45Q8NA69 505 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 TMEM116Q8NCL8 245 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 OR4F17Q8NGA8 305 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 FAM215AQ9Y5M1 114 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 NAV3Q8IVL0 2385 aa11.13□□□□□ -0.63
MKS1-201ENST00000313863 ICE1Q9Y2F5 2266 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 PPIAL4EA0A075B759 164 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 A0A1W2PPI3 338 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 C17orf100A8MU93 164 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 PPIAL4DF5H284 164 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 SYS1-DBNDD2H3BUS1 97 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 SLC25A17O43808 307 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 TCRAP04437 139 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 PPIAL4FP0DN26 164 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 C8orf46Q8TAG6 207 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 RNASE8Q8TDE3 154 aaKnown RBP11.12□□□□□ -0.63
MKS1-201ENST00000313863 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
MKS1-201ENST00000313863 ST6GALNAC6Q969X2 333 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 GSX1Q9H4S2 264 aaPredicted RBP11.12□□□□□ -0.63
MKS1-201ENST00000313863 OTORQ9NRC9 128 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 RPH3ALQ9UNE2 315 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 PLAUP00749 431 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 GP9P14770 177 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 CCL8P80075 99 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
MKS1-201ENST00000313863 PET117Q6UWS5 81 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 PGLYRP4Q96LB8 373 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 Q9H3A6 140 aa11.12□□□□□ -0.63
MKS1-201ENST00000313863 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
MKS1-201ENST00000313863 VWC2LB2RUY7 222 aa11.11□□□□□ -0.63
MKS1-201ENST00000313863 RPL27AP46776 148 aaKnown RBP11.11□□□□□ -0.63
MKS1-201ENST00000313863 UNQ5815/PRO19632Q6UWF5 114 aa11.11□□□□□ -0.63
MKS1-201ENST00000313863 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
MKS1-201ENST00000313863 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
MKS1-201ENST00000313863 CLEC5AQ9NY25 188 aa11.11□□□□□ -0.63
MKS1-201ENST00000313863 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
MKS1-201ENST00000313863 HSPB8Q9UJY1 196 aa11.11□□□□□ -0.63
MKS1-201ENST00000313863 LOC102724200A0A096LPH7 203 aaPredicted RBP11.1□□□□□ -0.63
MKS1-201ENST00000313863 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 VSTM5A8MXK1 200 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 C22orf46C9J442 243 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 IGHV3-48P01763 117 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 CEACAM8P31997 349 aaPredicted RBP11.1□□□□□ -0.63
MKS1-201ENST00000313863 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
MKS1-201ENST00000313863 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 IGFL3Q6UXB1 125 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 MS4A6AQ9H2W1 248 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 HIGD1AQ9Y241 93 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 ZNF835Q9Y2P0 537 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.1□□□□□ -0.63
MKS1-201ENST00000313863 A0A1B0GW15 77 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 NPIPB6E9PJ23 425 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 HAX1O00165 279 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 FBLN7Q53RD9 439 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 ASPHD1Q5U4P2 390 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 DEFB123Q8N688 67 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 GTSF1Q8WW33 167 aa11.1□□□□□ -0.63
MKS1-201ENST00000313863 TMEM178BH3BS89 294 aa11.09□□□□□ -0.63
MKS1-201ENST00000313863 PPBPP02775 128 aa11.09□□□□□ -0.63
MKS1-201ENST00000313863 COL8A1P27658 744 aa11.09□□□□□ -0.63
MKS1-201ENST00000313863 C12orf54Q6X4T0 127 aa11.09□□□□□ -0.63
MKS1-201ENST00000313863 PIP4P1Q86T03 277 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms