RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 PSMG4Q5JS54 123 aa11.42□□□□□ -0.58
FANCA-201ENST00000305699 TRPT1Q86TN4 253 aaKnown RBP11.42□□□□□ -0.58
FANCA-201ENST00000305699 OR51G1Q8NGK1 321 aa11.42□□□□□ -0.58
FANCA-201ENST00000305699 DEDD2Q8WXF8 326 aa11.42□□□□□ -0.58
FANCA-201ENST00000305699 LINC00476Q8WZB0 136 aa11.42□□□□□ -0.58
FANCA-201ENST00000305699 DEFB4AO15263 64 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 GPX4P36969 197 aaPredicted RBP11.41□□□□□ -0.58
FANCA-201ENST00000305699 RAB11AP62491 216 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 GAMTQ14353 236 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 MORN3Q6PF18 240 aaPredicted RBP11.41□□□□□ -0.58
FANCA-201ENST00000305699 SIGLEC15Q6ZMC9 328 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 CENPSQ8N2Z9 138 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 LRTM2Q8N967 370 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 C11orf45Q8TAV5 145 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 PHLDA1Q8WV24 401 aaPredicted RBP11.41□□□□□ -0.58
FANCA-201ENST00000305699 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 RBM38Q9H0Z9 239 aaKnown RBP11.41□□□□□ -0.58
FANCA-201ENST00000305699 C11orf68Q9H3H3 251 aaKnown RBP11.41□□□□□ -0.58
FANCA-201ENST00000305699 FBXL17Q9UF56 701 aa11.41□□□□□ -0.58
FANCA-201ENST00000305699 BUB3O43684 328 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 PITX3O75364 302 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 MED6O75586 246 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 SFT2D2O95562 160 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 SPP1P10451 314 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 NUP62P37198 522 aaPredicted RBP11.4□□□□□ -0.58
FANCA-201ENST00000305699 NANOS2P60321 138 aaKnown RBP11.4□□□□□ -0.58
FANCA-201ENST00000305699 SNRPD3P62318 126 aaKnown RBP11.4□□□□□ -0.58
FANCA-201ENST00000305699 MFFQ9GZY8 342 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 PFDN2Q9UHV9 154 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 TMED3Q9Y3Q3 217 aa11.4□□□□□ -0.58
FANCA-201ENST00000305699 FAM90A26D6RGX4 464 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 FABP1P07148 127 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 HOXB5P09067 269 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 SLC25A6P12236 298 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 ZNF90Q03938 601 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 TMEM41BQ5BJD5 291 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 TRIQKQ629K1 86 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 RAB40CQ96S21 281 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 MAGT1Q9H0U3 335 aa11.39□□□□□ -0.59
FANCA-201ENST00000305699 ZNF701M0R085 212 aaPredicted RBP11.38□□□□□ -0.59
FANCA-201ENST00000305699 C4BPBP20851 252 aa11.38□□□□□ -0.59
FANCA-201ENST00000305699 LYZP61626 148 aa11.38□□□□□ -0.59
FANCA-201ENST00000305699 OR2F1Q13607 317 aa11.38□□□□□ -0.59
FANCA-201ENST00000305699 PPP1R14BQ96C90 147 aa11.38□□□□□ -0.59
FANCA-201ENST00000305699 CIB3Q96Q77 187 aaPredicted RBP11.38□□□□□ -0.59
FANCA-201ENST00000305699 SRRQ9GZT4 340 aa11.38□□□□□ -0.59
FANCA-201ENST00000305699 IGKV1D-37A0A075B6S9 117 aa11.37□□□□□ -0.59
FANCA-201ENST00000305699 WRBO00258 174 aa11.37□□□□□ -0.59
FANCA-201ENST00000305699 SYNGR2O43760 224 aa11.37□□□□□ -0.59
FANCA-201ENST00000305699 GIG44P09565 113 aaPredicted RBP11.37□□□□□ -0.59
FANCA-201ENST00000305699 RPP30P78346 268 aaKnown RBP11.37□□□□□ -0.59
FANCA-201ENST00000305699 GGNBP1Q5YKI7 109 aa11.37□□□□□ -0.59
FANCA-201ENST00000305699 OR8G2PQ6IF36 304 aa11.37□□□□□ -0.59
FANCA-201ENST00000305699 CLEC5AQ9NY25 188 aa11.37□□□□□ -0.59
FANCA-201ENST00000305699 LINC00854A0A1B0GVQ3 168 aa11.36□□□□□ -0.59
FANCA-201ENST00000305699 SNRPGP15A8MWD9 76 aa11.36□□□□□ -0.59
FANCA-201ENST00000305699 UBE2MP61081 183 aaKnown RBP11.36□□□□□ -0.59
FANCA-201ENST00000305699 NAP1L6A6NFF2 107 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 BAK1Q16611 211 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 Q8NAQ8 132 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 TRGV9Q99603 122 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 SEPSECSQ9HD40 501 aaKnown RBP11.35□□□□□ -0.59
FANCA-201ENST00000305699 IGHV4-28A0A0C4DH34 117 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 C9orf170A2RU37 121 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 H3BP45 60 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 NDUFB6O95139 128 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 NUTF2P61970 127 aaKnown RBP11.35□□□□□ -0.59
FANCA-201ENST00000305699 SPANXN5Q5MJ07 72 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 LINC00052Q96N35 136 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 TBC1D24Q9ULP9 559 aa11.35□□□□□ -0.59
FANCA-201ENST00000305699 ADAP1O75689 374 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 MIFP14174 115 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 ID1P41134 155 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 AKR1C1Q04828 323 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 OR8I2Q8N0Y5 310 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 THAP8Q8NA92 274 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 COQ8AQ8NI60 647 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 FLVCR2Q9UPI3 526 aa11.34□□□□□ -0.59
FANCA-201ENST00000305699 STRAPQ9Y3F4 350 aaKnown RBP11.34□□□□□ -0.59
FANCA-201ENST00000305699 KMT2AQ03164 3969 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 IGKV1OR2-108A0A075B7D4 117 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 CENPXA8MT69 81 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 ZNF705EA8MWA4 302 aaPredicted RBP11.33□□□□□ -0.6
FANCA-201ENST00000305699 H3BMM0 161 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 RBMY1A1P0DJD3 496 aaKnown RBP11.33□□□□□ -0.6
FANCA-201ENST00000305699 RBMY1CP0DJD4 496 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 RBMY1FQ15415 496 aaKnown RBP11.33□□□□□ -0.6
FANCA-201ENST00000305699 C4orf46Q504U0 113 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 C2CD4CQ8TF44 421 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 WDR12Q9GZL7 423 aaKnown RBP11.33□□□□□ -0.6
FANCA-201ENST00000305699 XCL2Q9UBD3 114 aa11.33□□□□□ -0.6
FANCA-201ENST00000305699 IFNA21P01568 189 aa11.32□□□□□ -0.6
FANCA-201ENST00000305699 IGKV3-20P01619 116 aa11.32□□□□□ -0.6
FANCA-201ENST00000305699 HLA-DRB4P13762 266 aa11.32□□□□□ -0.6
FANCA-201ENST00000305699 NKX2-1P43699 371 aaPredicted RBP11.32□□□□□ -0.6
FANCA-201ENST00000305699 CSNK1G2-AS1Q8NCQ2 148 aa11.32□□□□□ -0.6
FANCA-201ENST00000305699 HLA-DRB4X5D2U9 266 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms