RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 RPUSD1Q9UJJ7 312 aaKnown RBP6.28□□□□□ -1.4
TM4SF1-201ENST00000305366 TRAV25A0A0B4J276 109 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 IGHV2-70DA0A0C4DH43 119 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 FAM181BA6NEQ2 426 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 MT-CO2P00403 227 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 ARL14EPLP0DKL9 152 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 DEFA4P12838 97 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 PRR20EP86478 221 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 PRR20CP86479 221 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 PRR20DP86480 221 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 PRR20BP86481 221 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 PRR20AP86496 221 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 PRCDQ00LT1 54 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 RAB31Q13636 194 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 TEPPQ6URK8 271 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 SLC25A48Q6ZT89 311 aaKnown RBP6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 TMEM144Q7Z5S9 345 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 NECAP1Q8NC96 275 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 OR1P1Q8NH06 330 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 C11orf52Q96A22 123 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 PFDN5Q99471 154 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 HIST1H2BLQ99880 126 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 LY96Q9Y6Y9 160 aa6.27□□□□□ -1.41
TM4SF1-201ENST00000305366 hADV38S2A0JD32 116 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 UPK2O00526 184 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 DVL1O14640 695 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 SAP30O75446 220 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 NDUFB4O95168 129 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 FABP4P15090 132 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 GCHFRP30047 84 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 RHOBP62745 196 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 MEF2CQ06413 473 aaPredicted RBP6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 CT83Q5H943 113 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 UTF1Q5T230 341 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 LYG1Q8N1E2 194 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 OR5R1Q8NH85 324 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 PACRGQ96M98 296 aaPredicted RBP6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 ELOVL1Q9BW60 279 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 FKBP11Q9NYL4 201 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 BET1LQ9NYM9 111 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 SLC25A10Q9UBX3 287 aaPredicted RBP6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 OR51B2Q9Y5P1 312 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 LINC00312Q9Y6C7 94 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 ARHGAP32A7KAX9 2087 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 TRAV9-1A0A075B6T8 112 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 A0A1W2PPQ1 181 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 NKX6-3A6NJ46 265 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 INS-IGF2F8WCM5 200 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 CA2P00918 260 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 IGHV3-7P01780 117 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 CT45A6P0DMU7 189 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 CT45A5P0DMU8 189 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 CT45A7P0DMV0 189 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 UBE2G2P60604 165 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 PAX2Q02962 417 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 RTL8BQ17RB0 113 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 C2orf83Q53S99 150 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 DUX4L9Q6RFH8 374 aaPredicted RBP6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 ZNF833PQ6ZTB9 187 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 PNKDQ8N490 385 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 STPG3Q8N7X2 389 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 OR5B3Q8NH48 314 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 RNASE8Q8TDE3 154 aaKnown RBP6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 LEAP2Q969E1 77 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 SFRP2Q96HF1 295 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 CCL13Q99616 98 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 ASCL2Q99929 193 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 ALKBH7Q9BT30 221 aaPredicted RBP6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 C1orf43Q9BWL3 253 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 ZMAT4Q9H898 229 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 PLEKHA3Q9HB20 300 aa6.26□□□□□ -1.41
TM4SF1-201ENST00000305366 A8MZ25 164 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 C9JCJ5 164 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 J3QR06 171 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 AMBPP02760 352 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 LINC00869P0C866 280 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 IL3RAP26951 378 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 RPL15P61313 204 aaKnown RBP6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 PRB3Q04118 309 aaPredicted RBP6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 JOSD1Q15040 202 aaPredicted RBP6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 PDZD11Q5EBL8 140 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 FAM71F2Q6NXP2 309 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 FAM216BQ8N7L0 139 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 OR1L8Q8NGR8 309 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 OSR1Q8TAX0 266 aaPredicted RBP6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 SLC35E1Q96K37 410 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 GAL3ST2Q9H3Q3 398 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 SLC45A2Q9UMX9 530 aa6.25□□□□□ -1.41
TM4SF1-201ENST00000305366 TRBV20OR9-2A0A075B6H5 130 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 SCO2A0A1W2PP80 73 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 A0A1W2PRD5 423 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 A0A1W2PRF3 423 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 A0A1W2PRM7 423 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 MMP23AO75900 390 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 TOX4O94842 621 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 MFAP4P55083 255 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 ARF6P62330 175 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 FAM78BQ5VT40 261 aa6.24□□□□□ -1.41
TM4SF1-201ENST00000305366 CDPF1Q6NVV7 123 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms