RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 HIST1H2BOP23527 126 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 HIST1H2BBP33778 126 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 HIST1H2BDP58876 126 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 HIST1H2BCP62807 126 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 HIST2H2BEQ16778 126 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 HIST1H2BHQ93079 126 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 RCHY1Q96PM5 261 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 HIST1H2BNQ99877 126 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 HIST1H2BMQ99879 126 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 MRPS18CQ9Y3D5 142 aaKnown RBP11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 Q0VFX4 171 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 SAMD13Q5VXD3 122 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 CKS1BP61024 79 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 ASCL4Q6XD76 172 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 GGNQ86UU5 652 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 MGST2Q99735 147 aa11.18□□□□□ -0.62
CHRFAM7A-201ENST00000299847 TMEM155Q4W5P6 130 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 SMKR1H3BMG3 65 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 ZNF688P0C7X2 276 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 PHLDA1Q8WV24 401 aaPredicted RBP11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 J3QRE1 110 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 PSPNO60542 156 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 FCN3O75636 299 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 IGLV3-19P01714 112 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 PSG1P11464 419 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 SLC25A39Q9BZJ4 359 aaPredicted RBP11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 GREB1Q4ZG55 1949 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 S100A7L2Q5SY68 101 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 MST1P26927 711 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 LCNL1Q6ZST4 164 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 C5orf30Q96GV9 206 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 ZNRD1Q9P1U0 126 aa11.17□□□□□ -0.62
CHRFAM7A-201ENST00000299847 TRGV1A0A0A0MS02 117 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 CD59P13987 128 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 CCL1P22362 96 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 SRSF4Q08170 494 aaKnown RBP11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 MAPK1IP1LQ8NDC0 245 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 MBD3L1Q8WWY6 194 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 IGHV1-3A0A0C4DH29 117 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 TAF1LQ8IZX4 1826 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 DUSP14O95147 198 aaKnown RBP11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 TPRP12270 2363 aaKnown RBP11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 IGLV3-12A0A075B6K2 115 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 TEX38Q6PEX7 206 aa11.16□□□□□ -0.62
CHRFAM7A-201ENST00000299847 TRGV11A0A075B6L2 103 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 LOC102723996A0A087X1L8 192 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 ERCC8Q13216 396 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 ZNF138P52744 262 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 ZFP36L1Q07352 338 aaKnown RBP11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 OR2K2Q8NGT1 345 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 CST9LQ9H4G1 147 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 TRAV9-2A0A087WT02 112 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 NABP1Q96AH0 204 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 CRYGSP22914 178 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 PRTN3P24158 256 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 LAGE3Q14657 143 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 ATP5L2Q7Z4Y8 100 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 GGTLC1Q9BX51 225 aa11.15□□□□□ -0.62
CHRFAM7A-201ENST00000299847 A0A1W2PRE2 83 aa11.15□□□□□ -0.63
CHRFAM7A-201ENST00000299847 MLANAQ16655 118 aa11.15□□□□□ -0.63
CHRFAM7A-201ENST00000299847 LYPD2Q6UXB3 125 aa11.15□□□□□ -0.63
CHRFAM7A-201ENST00000299847 IFI27L1Q96BM0 104 aa11.15□□□□□ -0.63
CHRFAM7A-201ENST00000299847 OSTCQ9NRP0 149 aa11.15□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ARHGEF17Q96PE2 2063 aaPredicted RBP11.15□□□□□ -0.63
CHRFAM7A-201ENST00000299847 RALGAPA1Q6GYQ0 2036 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 A0A0G2JNJ9 132 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 H3BUX3 64 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 TSKUQ8WUA8 353 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 Q9UFV3 132 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SH2D1AO60880 128 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ZNF876PQ49A33 203 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ZNF625Q96I27 306 aaPredicted RBP11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 A0A087WWL8 130 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SLC25A2Q9BXI2 301 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 TPTE2P1Q5T6R2 138 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ABCA7Q8IZY2 2146 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 WNK3Q9BYP7 1800 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SRRM4A7MD48 611 aaKnown RBP11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 M0R2P5 195 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
CHRFAM7A-201ENST00000299847 TRAV8-1A0A0A6YYK1 113 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ID3Q02535 119 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 CFHR3Q02985 330 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 LINC00477Q96M19 166 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 STAG3L3P0CL85 134 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 COL8A2P25067 703 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 E9PLN8 166 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 HIST1H2BLQ99880 126 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SCN10AQ9Y5Y9 1956 aa11.13□□□□□ -0.63
CHRFAM7A-201ENST00000299847 HIST1H4AP62805 103 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms