RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 ANKRD17O75179 2603 aaKnown RBP17.88■□□□□ 0.45
VSTM4-201ENST00000298454 PGPEP1LA6NFU8 196 aa17.87■□□□□ 0.45
VSTM4-201ENST00000298454 RD3LP0DJH9 198 aa17.87■□□□□ 0.45
VSTM4-201ENST00000298454 ELOBQ15370 118 aa17.87■□□□□ 0.45
VSTM4-201ENST00000298454 CHD6Q8TD26 2715 aa17.87■□□□□ 0.45
VSTM4-201ENST00000298454 UNQ5815/PRO19632Q6UWF5 114 aa17.87■□□□□ 0.45
VSTM4-201ENST00000298454 LINC01356Q8N9X3 169 aa17.87■□□□□ 0.45
VSTM4-201ENST00000298454 C11orf52Q96A22 123 aa17.87■□□□□ 0.45
VSTM4-201ENST00000298454 FXYD5Q96DB9 178 aa17.87■□□□□ 0.45
VSTM4-201ENST00000298454 CXorf65A6NEN9 183 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 F8W735 103 aaPredicted RBP17.86■□□□□ 0.45
VSTM4-201ENST00000298454 IGHV3-23P01764 117 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 RAB5AP20339 215 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 SUMO1P63165 101 aaKnown RBP17.86■□□□□ 0.45
VSTM4-201ENST00000298454 LEMD1Q68G75 181 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 C16orf82Q7Z2V1 217 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 LINC01551Q86U37 167 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 Q8WTZ3 238 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 TMEM242Q9NWH2 141 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 MLXQ9UH92 298 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 PTPN13Q12923 2485 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 A0A1W2PRE2 83 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 CRYBB3P26998 211 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 MFAP4P55083 255 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 THYN1Q9P016 225 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 MOB4Q9Y3A3 225 aa17.86■□□□□ 0.45
VSTM4-201ENST00000298454 KMT2BQ9UMN6 2715 aaPredicted RBP17.85■□□□□ 0.45
VSTM4-201ENST00000298454 CLDN34H7C241 214 aa17.85■□□□□ 0.45
VSTM4-201ENST00000298454 GNG7O60262 68 aa17.85■□□□□ 0.45
VSTM4-201ENST00000298454 DEFB113Q30KQ7 82 aa17.85■□□□□ 0.45
VSTM4-201ENST00000298454 HIGD1AQ9Y241 93 aa17.85■□□□□ 0.45
VSTM4-201ENST00000298454 RNF223E7ERA6 249 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 G3V318 75 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 AMY1AP04745 511 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 FOLR2P14207 255 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 GATA3P23771 443 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 FAM110DQ8TAY7 271 aaPredicted RBP17.84■□□□□ 0.45
VSTM4-201ENST00000298454 C21orf62Q9NYP8 219 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 CXCL1P09341 107 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 LY6EQ16553 131 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 Q56UQ5 140 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 CTDSP1Q9GZU7 261 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 FBXL7Q9UJT9 491 aa17.84■□□□□ 0.45
VSTM4-201ENST00000298454 TOMM40O96008 361 aa17.83■□□□□ 0.45
VSTM4-201ENST00000298454 BEX4Q9NWD9 120 aaPredicted RBP17.83■□□□□ 0.45
VSTM4-201ENST00000298454 TGIF2-C20orf24A0A0A6YYL0 155 aa17.83■□□□□ 0.44
VSTM4-201ENST00000298454 RPL35P42766 123 aaKnown RBP17.83■□□□□ 0.44
VSTM4-201ENST00000298454 ZFP82Q8N141 532 aa17.83■□□□□ 0.44
VSTM4-201ENST00000298454 ELOVL1Q9BW60 279 aa17.83■□□□□ 0.44
VSTM4-201ENST00000298454 MRPL27Q9P0M9 148 aaKnown RBP17.83■□□□□ 0.44
VSTM4-201ENST00000298454 TENM4Q6N022 2769 aa17.82■□□□□ 0.44
VSTM4-201ENST00000298454 H3BUX3 64 aa17.82■□□□□ 0.44
VSTM4-201ENST00000298454 FABP1P07148 127 aa17.82■□□□□ 0.44
VSTM4-201ENST00000298454 HNF1AP20823 631 aa17.82■□□□□ 0.44
VSTM4-201ENST00000298454 ZNF491Q8N8L2 437 aa17.82■□□□□ 0.44
VSTM4-201ENST00000298454 STXBP6Q8NFX7 210 aa17.82■□□□□ 0.44
VSTM4-201ENST00000298454 ZNF48Q96MX3 618 aaPredicted RBP17.82■□□□□ 0.44
VSTM4-201ENST00000298454 SLC25A39Q9BZJ4 359 aaPredicted RBP17.82■□□□□ 0.44
VSTM4-201ENST00000298454 PRELID1Q9Y255 219 aa17.82■□□□□ 0.44
VSTM4-201ENST00000298454 TRAV30A0A087WSZ9 112 aa17.81■□□□□ 0.44
VSTM4-201ENST00000298454 TGFAP01135 160 aa17.81■□□□□ 0.44
VSTM4-201ENST00000298454 PLA2G2AP14555 144 aa17.81■□□□□ 0.44
VSTM4-201ENST00000298454 IL4P05112 153 aa17.81■□□□□ 0.44
VSTM4-201ENST00000298454 GP9P14770 177 aa17.81■□□□□ 0.44
VSTM4-201ENST00000298454 OCC1Q8TAD7 63 aa17.81■□□□□ 0.44
VSTM4-201ENST00000298454 BLNKQ8WV28 456 aa17.81■□□□□ 0.44
VSTM4-201ENST00000298454 ABCA12Q86UK0 2595 aa17.8■□□□□ 0.44
VSTM4-201ENST00000298454 LOXL1Q08397 574 aaPredicted RBP17.8■□□□□ 0.44
VSTM4-201ENST00000298454 Q5PR19 223 aa17.8■□□□□ 0.44
VSTM4-201ENST00000298454 NECAP1Q8NC96 275 aa17.8■□□□□ 0.44
VSTM4-201ENST00000298454 OR2T8A6NH00 312 aa17.8■□□□□ 0.44
VSTM4-201ENST00000298454 YPEL3P61236 119 aaPredicted RBP17.8■□□□□ 0.44
VSTM4-201ENST00000298454 HIST2H2BCQ6DN03 193 aa17.8■□□□□ 0.44
VSTM4-201ENST00000298454 C2CD4CQ8TF44 421 aa17.8■□□□□ 0.44
VSTM4-201ENST00000298454 RNF125Q96EQ8 232 aa17.8■□□□□ 0.44
VSTM4-201ENST00000298454 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.79■□□□□ 0.44
VSTM4-201ENST00000298454 MDFIC2A0A1B0GVS7 189 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 H7BYZ3 331 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 HIST1H1BP16401 226 aaKnown RBP17.79■□□□□ 0.44
VSTM4-201ENST00000298454 RANP62826 216 aaKnown RBP17.79■□□□□ 0.44
VSTM4-201ENST00000298454 FLI1Q01543 452 aaPredicted RBP17.79■□□□□ 0.44
VSTM4-201ENST00000298454 A6NDX4 124 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 HELTA6NFD8 242 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 NBEAP1P0C6P0 100 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 RHOGP84095 191 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 C15orf32Q32M92 178 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 ZNF329Q86UD4 541 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 BCL6BQ8N143 479 aaPredicted RBP17.79■□□□□ 0.44
VSTM4-201ENST00000298454 LRRC75A-AS1Q8N1F1 130 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 ANAPC16Q96DE5 110 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 LINC00527Q9UJ94 153 aa17.79■□□□□ 0.44
VSTM4-201ENST00000298454 WI2-2373I1.2A0A1W2PRP0 233 aa17.78■□□□□ 0.44
VSTM4-201ENST00000298454 H3BTX0 84 aa17.78■□□□□ 0.44
VSTM4-201ENST00000298454 C9orf152Q5JTZ5 239 aa17.78■□□□□ 0.44
VSTM4-201ENST00000298454 TMEM68Q96MH6 324 aa17.78■□□□□ 0.44
VSTM4-201ENST00000298454 NBPF19A0A087WUL8 3843 aa17.77■□□□□ 0.44
VSTM4-201ENST00000298454 C9JCJ5 164 aa17.77■□□□□ 0.44
VSTM4-201ENST00000298454 USF2Q15853 346 aaPredicted RBP17.77■□□□□ 0.44
VSTM4-201ENST00000298454 KLK9Q2XQG4 91 aa17.77■□□□□ 0.44
VSTM4-201ENST00000298454 ZNF600Q6ZNG1 722 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 319.3 ms