RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 DUX4L9Q6RFH8 374 aaPredicted RBP15.43■□□□□ 0.06
TRA2A-201ENST00000297071 CCL13Q99616 98 aa15.43■□□□□ 0.06
TRA2A-201ENST00000297071 LOC105371242A0A075B767 164 aa15.43■□□□□ 0.06
TRA2A-201ENST00000297071 SP9P0CG40 484 aa15.43■□□□□ 0.06
TRA2A-201ENST00000297071 FOXA3P55318 350 aaPredicted RBP15.43■□□□□ 0.06
TRA2A-201ENST00000297071 FAM201AQ5SY85 155 aa15.43■□□□□ 0.06
TRA2A-201ENST00000297071 C16orf54Q6UWD8 224 aa15.43■□□□□ 0.06
TRA2A-201ENST00000297071 C12orf54Q6X4T0 127 aa15.43■□□□□ 0.06
TRA2A-201ENST00000297071 ARL6IP6Q8N6S5 226 aa15.43■□□□□ 0.06
TRA2A-201ENST00000297071 RNASE8Q8TDE3 154 aaKnown RBP15.43■□□□□ 0.06
TRA2A-201ENST00000297071 IGHV1-24A0A0C4DH33 117 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 PGPA6NDG6 321 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 HAX1O00165 279 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 CDX4O14627 284 aaPredicted RBP15.42■□□□□ 0.06
TRA2A-201ENST00000297071 LEPROTL1O95214 131 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 MOSP00540 346 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 P01737 135 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 CAMPP49913 170 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 SSBP2P81877 361 aaPredicted RBP15.42■□□□□ 0.06
TRA2A-201ENST00000297071 SPATA12Q7Z6I5 190 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 PMCHL2Q9BQD1 86 aa15.42■□□□□ 0.06
TRA2A-201ENST00000297071 SSBP4Q9BWG4 385 aaPredicted RBP15.42■□□□□ 0.06
TRA2A-201ENST00000297071 ZFHX2Q9C0A1 2572 aaPredicted RBP15.42■□□□□ 0.06
TRA2A-201ENST00000297071 M0R296 226 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 CORTO00230 105 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 IGLV2-23P01705 113 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 NBEAP1P0C6P0 100 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 GPR6P46095 362 aaPredicted RBP15.41■□□□□ 0.06
TRA2A-201ENST00000297071 SLC25A34Q6PIV7 304 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 DHRS13Q6UX07 377 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 SEM1Q6ZVN7 128 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 FAM216BQ8N7L0 139 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 FDCSPQ8NFU4 85 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 WASHC3Q9Y3C0 194 aa15.41■□□□□ 0.06
TRA2A-201ENST00000297071 LOC102724200A0A096LPH7 203 aaPredicted RBP15.4■□□□□ 0.06
TRA2A-201ENST00000297071 MC5RP33032 325 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 VMA21Q3ZAQ7 101 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 PRR27Q6MZM9 219 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 DEFB125Q8N687 156 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 GSX1Q9H4S2 264 aaPredicted RBP15.4■□□□□ 0.06
TRA2A-201ENST00000297071 HSPB8Q9UJY1 196 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 HSBP1L1C9JCN9 74 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 E7EUB6 86 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 GP9P14770 177 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 KIR3DL3Q8N743 410 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 TMEM116Q8NCL8 245 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 NUP37Q8NFH4 326 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 GTSF1Q8WW33 167 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 RND1Q92730 232 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 ST6GALNAC6Q969X2 333 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 EPG5Q9HCE0 2579 aa15.4■□□□□ 0.06
TRA2A-201ENST00000297071 A0A1B0GW15 77 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 PPBPP02775 128 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 TCRAP04437 139 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 HOXB4P17483 251 aaPredicted RBP15.39■□□□□ 0.05
TRA2A-201ENST00000297071 LGALS7P47929 136 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 GNG5P63218 68 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 TCF24Q7RTU0 167 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 ASCL5Q7RTU5 278 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 OR4C5Q8NGB2 326 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 DPF1Q92782 380 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 MAP1LC3CQ9BXW4 147 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 SCRT2Q9NQ03 307 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 CLEC5AQ9NY25 188 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 TMEM14CQ9P0S9 112 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 WDFY4Q6ZS81 3184 aa15.39■□□□□ 0.05
TRA2A-201ENST00000297071 ZNF474Q6S9Z5 364 aaPredicted RBP15.38■□□□□ 0.05
TRA2A-201ENST00000297071 DAZAP1Q96EP5 407 aaKnown RBP15.38■□□□□ 0.05
TRA2A-201ENST00000297071 OTORQ9NRC9 128 aa15.38■□□□□ 0.05
TRA2A-201ENST00000297071 TAX1BP3O14907 124 aa15.38■□□□□ 0.05
TRA2A-201ENST00000297071 TNFRSF1AP19438 455 aa15.38■□□□□ 0.05
TRA2A-201ENST00000297071 CCL11P51671 97 aa15.38■□□□□ 0.05
TRA2A-201ENST00000297071 BVES-AS1Q5T3Y7 98 aa15.38■□□□□ 0.05
TRA2A-201ENST00000297071 TEX45Q8NA69 505 aa15.38■□□□□ 0.05
TRA2A-201ENST00000297071 C8orf46Q8TAG6 207 aa15.38■□□□□ 0.05
TRA2A-201ENST00000297071 CHD8Q9HCK8 2581 aa15.37■□□□□ 0.05
TRA2A-201ENST00000297071 CD5LO43866 347 aa15.37■□□□□ 0.05
TRA2A-201ENST00000297071 APOHP02749 345 aaPredicted RBP15.37■□□□□ 0.05
TRA2A-201ENST00000297071 DEFB108BQ8NET1 73 aa15.37■□□□□ 0.05
TRA2A-201ENST00000297071 H1FXQ92522 213 aaKnown RBP15.37■□□□□ 0.05
TRA2A-201ENST00000297071 MRPL36Q9P0J6 103 aaKnown RBP15.37■□□□□ 0.05
TRA2A-201ENST00000297071 KNTC1P50748 2209 aa15.37■□□□□ 0.05
TRA2A-201ENST00000297071 A0A1W2PPI3 338 aa15.36■□□□□ 0.05
TRA2A-201ENST00000297071 HIST1H1AQ02539 215 aaPredicted RBP15.36■□□□□ 0.05
TRA2A-201ENST00000297071 LINC01545Q5VT33 79 aa15.36■□□□□ 0.05
TRA2A-201ENST00000297071 LINC00322Q6ZN03 302 aaPredicted RBP15.36■□□□□ 0.05
TRA2A-201ENST00000297071 PTPRZ1P23471 2315 aaPredicted RBP15.36■□□□□ 0.05
TRA2A-201ENST00000297071 TOX4O94842 621 aa15.36■□□□□ 0.05
TRA2A-201ENST00000297071 Q9H3A6 140 aa15.36■□□□□ 0.05
TRA2A-201ENST00000297071 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.35■□□□□ 0.05
TRA2A-201ENST00000297071 CHEK1O14757 476 aa15.35■□□□□ 0.05
TRA2A-201ENST00000297071 MRGPRG-AS1Q2M3A8 158 aa15.35■□□□□ 0.05
TRA2A-201ENST00000297071 MPV17L2Q567V2 206 aa15.35■□□□□ 0.05
TRA2A-201ENST00000297071 VHLLQ6RSH7 139 aa15.35■□□□□ 0.05
TRA2A-201ENST00000297071 Q86TA4 180 aa15.35■□□□□ 0.05
TRA2A-201ENST00000297071 PGLYRP4Q96LB8 373 aa15.35■□□□□ 0.05
TRA2A-201ENST00000297071 ZNRD1Q9P1U0 126 aa15.35■□□□□ 0.05
TRA2A-201ENST00000297071 RNF24Q9Y225 148 aa15.35■□□□□ 0.05
TRA2A-201ENST00000297071 CEACAM4O75871 244 aa15.34■□□□□ 0.05
TRA2A-201ENST00000297071 OR1B1Q8NGR6 318 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms