RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 C4orf3Q8WVX3 66 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 SRSF12Q8WXF0 261 aaKnown RBP9.4□□□□□ -0.91
HMGB2-201ENST00000296503 ACY3Q96HD9 319 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 RARRES2Q99969 163 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 SRD5A3Q9H8P0 318 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 GNB4Q9HAV0 340 aa9.4□□□□□ -0.91
HMGB2-201ENST00000296503 CYB5BO43169 146 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 KBTBD11O94819 623 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 TRGV3P03979 118 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 GZMBP10144 247 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 FHITP49789 147 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.911e-10■□□□□ 10.1
HMGB2-201ENST00000296503 OR4A47Q6IF82 309 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 LINC00482Q8N8I6 264 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 OR11H1Q8NG94 326 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 OR2G3Q8NGZ4 309 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 MYOZ3Q8TDC0 251 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 FRZBQ92765 325 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 SPIN2AQ99865 258 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 SPIN2BQ9BPZ2 258 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 CMYA5Q8N3K9 4069 aa9.39□□□□□ -0.91
HMGB2-201ENST00000296503 PIGBOS1A0A0B4J2F0 54 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 A0A1B0GU03 582 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 ZNF727A8MUV8 499 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 S1PR2O95136 353 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 METTL15P1P0C7V9 234 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 FABP4P15090 132 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 ATP6V0CP27449 155 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 GAGE1Q13065 139 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 C10orf55Q5SWW7 151 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 ASPHD1Q5U4P2 390 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
HMGB2-201ENST00000296503 TBC1D26Q86UD7 250 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 OR2C3Q8N628 320 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 DPF1Q92782 380 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 BSCL2Q96G97 398 aaPredicted RBP9.38□□□□□ -0.91
HMGB2-201ENST00000296503 NOTCH1P46531 2555 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 TGIF2-C20orf24A0A0A6YYL0 155 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 LOC102723971A0A1B0GUV8 181 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 GGCTO75223 188 aaKnown RBP9.38□□□□□ -0.91
HMGB2-201ENST00000296503 DFFBO76075 338 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 IGHV3-11P01762 117 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 UCP1P25874 307 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 RPL27AP46776 148 aaKnown RBP9.38□□□□□ -0.91
HMGB2-201ENST00000296503 PIGPP57054 158 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 ERVK-16P61578 105 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 RPL8P62917 257 aaKnown RBP9.38□□□□□ -0.91
HMGB2-201ENST00000296503 SAMD5Q5TGI4 173 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 CCDC71LQ8N9Z2 235 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 OR1N2Q8NGR9 330 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 OR4A5Q8NH83 315 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 SH3BGRL3Q9H299 93 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 CBY1Q9Y3M2 126 aa9.38□□□□□ -0.91
HMGB2-201ENST00000296503 H3BUA1 57 aa9.37□□□□□ -0.91
HMGB2-201ENST00000296503 KRASP01116 189 aa9.37□□□□□ -0.91
HMGB2-201ENST00000296503 OR9G9P0C7N8 305 aa9.37□□□□□ -0.91
HMGB2-201ENST00000296503 CCL20P78556 96 aa9.37□□□□□ -0.91
HMGB2-201ENST00000296503 HAGHQ16775 308 aa9.37□□□□□ -0.91
HMGB2-201ENST00000296503 ZNF664Q8N3J9 261 aa9.37□□□□□ -0.91
HMGB2-201ENST00000296503 TMEM140Q9NV12 185 aa9.37□□□□□ -0.91
HMGB2-201ENST00000296503 TRAV3A0A0B4J244 114 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 PPP5D1E7EU14 171 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 UPK2O00526 184 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 RUNX1Q01196 453 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 TNFRSF9Q07011 255 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 POU2AF1Q16633 256 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 ZNF585BQ52M93 769 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 ZNF343Q6P1L6 599 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 CYB561D1Q8N8Q1 229 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 MBD3L1Q8WWY6 194 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 SDF2L1Q9HCN8 221 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 SLC2A9Q9NRM0 540 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 LYRM2Q9NU23 88 aaPredicted RBP9.36□□□□□ -0.91
HMGB2-201ENST00000296503 RCL1Q9Y2P8 373 aaKnown RBP9.36□□□□□ -0.91
HMGB2-201ENST00000296503 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 IL6RP08887 468 aaPredicted RBP9.36□□□□□ -0.91
HMGB2-201ENST00000296503 LGALS1P09382 135 aaKnown RBP9.36□□□□□ -0.91
HMGB2-201ENST00000296503 MYOD1P15172 320 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 G6PCP35575 357 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 FAM90A2PQ658T7 463 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 OR1P1Q8NH06 330 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 TMEM56Q96MV1 263 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 MCRIP2Q9BUT9 160 aaKnown RBP9.36□□□□□ -0.91
HMGB2-201ENST00000296503 COMMD5Q9GZQ3 224 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 TMEM56-RWDD3S4R434 201 aa9.36□□□□□ -0.91
HMGB2-201ENST00000296503 E7EUB6 86 aa9.35□□□□□ -0.91
HMGB2-201ENST00000296503 SCGB1D2O95969 90 aa9.35□□□□□ -0.91
HMGB2-201ENST00000296503 AMBPP02760 352 aa9.35□□□□□ -0.91
HMGB2-201ENST00000296503 SERPINE2P07093 398 aa9.35□□□□□ -0.91
HMGB2-201ENST00000296503 TAS2R30P59541 319 aa9.35□□□□□ -0.91
HMGB2-201ENST00000296503 LYZL2Q7Z4W2 148 aa9.35□□□□□ -0.91
HMGB2-201ENST00000296503 TTC9CQ8N5M4 171 aa9.35□□□□□ -0.91
HMGB2-201ENST00000296503 PRO1933Q9H354 126 aa9.35□□□□□ -0.91
HMGB2-201ENST00000296503 TEX22C9J3V5 150 aa9.34□□□□□ -0.91
HMGB2-201ENST00000296503 LINC01619G3V211 115 aa9.34□□□□□ -0.91
HMGB2-201ENST00000296503 M0R143 59 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms