RNA–Protein interactions for RNA: ENST00000296027.4

CXCL5-201, Transcript of C-X-C motif chemokine ligand 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL5, Length 2,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5-201ENST00000296027 TRAV34A0A0B4J273 112 aa10.68□□□□□ -0.7
CXCL5-201ENST00000296027 G3V4G9 280 aa10.68□□□□□ -0.7
CXCL5-201ENST00000296027 SIVA1O15304 175 aa10.68□□□□□ -0.7
CXCL5-201ENST00000296027 REG1AP05451 166 aa10.68□□□□□ -0.7
CXCL5-201ENST00000296027 ERHP84090 104 aaKnown RBP10.68□□□□□ -0.7
CXCL5-201ENST00000296027 OR5AN1Q8NGI8 311 aa10.68□□□□□ -0.7
CXCL5-201ENST00000296027 CSMD1Q96PZ7 3565 aa10.68□□□□□ -0.7
CXCL5-201ENST00000296027 NAV3Q8IVL0 2385 aa10.68□□□□□ -0.7
CXCL5-201ENST00000296027 IGHV3-72A0A0B4J1Y9 119 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 CGB1A6NKQ9 187 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 CA1P00915 261 aaPredicted RBP10.67□□□□□ -0.7
CXCL5-201ENST00000296027 C8orf88P0DMB2 117 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 PYYP10082 97 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 VAMP3Q15836 100 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 KIAA1644Q3SXP7 199 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 NIT1Q86X76 327 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 NPIPB3Q92617 1050 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 TPSG1Q9NRR2 321 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 MRPL36Q9P0J6 103 aaKnown RBP10.67□□□□□ -0.7
CXCL5-201ENST00000296027 PPIAL4AQ9Y536 164 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 ZNF318Q5VUA4 2279 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 TMEM178BH3BS89 294 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 APELAP0DMC3 54 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 TAS2R45P59539 299 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 TIGITQ495A1 244 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 COX19Q49B96 90 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 FAM167A-AS1Q96KT0 104 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
CXCL5-201ENST00000296027 SLC25A2Q9BXI2 301 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 LY96Q9Y6Y9 160 aa10.67□□□□□ -0.7
CXCL5-201ENST00000296027 PTPRZ1P23471 2315 aaPredicted RBP10.67□□□□□ -0.7
CXCL5-201ENST00000296027 ZNF705FA8MVS1 300 aaPredicted RBP10.66□□□□□ -0.7
CXCL5-201ENST00000296027 PRRG2O14669 202 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 PLAUP00749 431 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 IGLV2-8P01709 118 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 ZNF705DP0CH99 300 aaPredicted RBP10.66□□□□□ -0.7
CXCL5-201ENST00000296027 ZNF705BP0CI00 300 aaPredicted RBP10.66□□□□□ -0.7
CXCL5-201ENST00000296027 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
CXCL5-201ENST00000296027 MEF2CQ06413 473 aaPredicted RBP10.66□□□□□ -0.7
CXCL5-201ENST00000296027 TDRG1Q3Y452 100 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 RUSC1-AS1Q66K80 236 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 CCDC144NLQ6NUI1 221 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 PET117Q6UWS5 81 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 Q6ZWC4 215 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 BAGE3Q86Y29 109 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 BAGE2Q86Y30 109 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 SERTAD4Q9NUC0 356 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 PSG1P11464 419 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 ZNF562Q6V9R5 426 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 OR5AU1Q8NGC0 362 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 OR4C13Q8NGP0 309 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 APC2O95996 2303 aa10.66□□□□□ -0.7
CXCL5-201ENST00000296027 PSMB11A5LHX3 300 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 TOX4O94842 621 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 TMEM30BQ3MIR4 351 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 C19orf35Q6ZS72 473 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 TBX15Q96SF7 602 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 TMEM106BQ9NUM4 274 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 NAT8BQ9UHF3 227 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 DCHS2Q6V1P9 2916 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 POLEQ07864 2286 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 NDUFB3O43676 98 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 ENSAO43768 121 aaKnown RBP10.65□□□□□ -0.7
CXCL5-201ENST00000296027 CNIH1O95406 144 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 USF1P22415 310 aaPredicted RBP10.65□□□□□ -0.7
CXCL5-201ENST00000296027 ATP5IP56385 69 aaPredicted RBP10.65□□□□□ -0.7
CXCL5-201ENST00000296027 MMDQ15546 238 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 TMEM183BQ1AE95 376 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 MRPL54Q6P161 138 aaKnown RBP10.65□□□□□ -0.7
CXCL5-201ENST00000296027 PATE2Q6UY27 113 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 OR1N2Q8NGR9 330 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 FAM168AQ92567 244 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 HSPB9Q9BQS6 159 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 SSBP3Q9BWW4 388 aaPredicted RBP10.65□□□□□ -0.7
CXCL5-201ENST00000296027 ZNF355PQ9NSJ1 428 aa10.65□□□□□ -0.7
CXCL5-201ENST00000296027 COX7A2P2O60397 106 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 IGLV2-23P01705 113 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 CX3CL1P78423 397 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 IBA57Q5T440 356 aaKnown RBP10.64□□□□□ -0.71
CXCL5-201ENST00000296027 HCP5Q6MZN7 132 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 TMEM167AQ8TBQ9 72 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 C19orf24Q9BVV8 132 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 ARL2-SNX15V9GYD0 113 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 TPRP12270 2363 aaKnown RBP10.64□□□□□ -0.71
CXCL5-201ENST00000296027 ABCA1O95477 2261 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 CUL9Q8IWT3 2517 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 TRAV9-1A0A075B6T8 112 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 IGHV3-21A0A0B4J1V1 117 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 A0A1W2PRE2 83 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 AZU1P20160 251 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 CDKN1AP38936 164 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 PPOXP50336 477 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 LRRC10Q5BKY1 277 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 PNKDQ8N490 385 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 ST6GALNAC6Q969X2 333 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 GNB4Q9HAV0 340 aa10.64□□□□□ -0.71
CXCL5-201ENST00000296027 CEP295Q9C0D2 2601 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms