RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SLC25A39Q9BZJ4 359 aaPredicted RBP10.5□□□□□ -0.73
PTCD1-201ENST00000292478 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 IGKV1D-17A0A075B6S4 117 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 SELLP14151 372 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
PTCD1-201ENST00000292478 ALPK2Q86TB3 2170 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 PSG1P11464 419 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 THADAQ6YHU6 1953 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 IFI27P40305 119 aaPredicted RBP10.49□□□□□ -0.73
PTCD1-201ENST00000292478 LINC01551Q86U37 167 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 SSBP4Q9BWG4 385 aaPredicted RBP10.49□□□□□ -0.73
PTCD1-201ENST00000292478 JKAMPQ9P055 326 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 SMPXQ9UHP9 88 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 KIF26BQ2KJY2 2108 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 HEATR5BQ9P2D3 2071 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 TRBV7-1A0A0A6YYK4 115 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 TRAV5A0A0B4J249 113 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 TMEM155Q4W5P6 130 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 VCX2Q9H322 139 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 TSC2P49815 1807 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 DPM2O94777 84 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 CD24P25063 80 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 STHQ8IWL8 128 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 LAMTOR2Q9Y2Q5 125 aa10.49□□□□□ -0.73
PTCD1-201ENST00000292478 LINC00473A8K010 186 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 LILRA1O75019 489 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 C5orf64Q2M2E5 130 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 RNF144BQ7Z419 303 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 YAE1D1Q9NRH1 226 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 ZNF815PA8K554 130 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 SLC25A2Q9BXI2 301 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 DOPEY2Q9Y3R5 2298 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 NIT1Q86X76 327 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 FAM186AA6NE01 2351 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 TRAV40A0A0B4J280 105 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 PSMB11A5LHX3 300 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 TCRAP04437 139 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 LMO1P25800 156 aa10.48□□□□□ -0.73
PTCD1-201ENST00000292478 ARHGEF17Q96PE2 2063 aaPredicted RBP10.48□□□□□ -0.73
PTCD1-201ENST00000292478 PGPEP1LA6NFU8 196 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 HIST3H2BBQ8N257 126 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 MGAMO43451 1857 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 IGKV3OR2-268A0A0C4DH90 116 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 C10orf55Q5SWW7 151 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 SPATA31B1PQ5VZV4 182 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 C5orf30Q96GV9 206 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 HIST1H2BLQ99880 126 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 C15orf62A8K5M9 175 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 MS4A6AQ9H2W1 248 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 PRB3Q04118 309 aaPredicted RBP10.47□□□□□ -0.73
PTCD1-201ENST00000292478 HGFACQ04756 655 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 C15orf32Q32M92 178 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 ZNF474Q6S9Z5 364 aaPredicted RBP10.47□□□□□ -0.73
PTCD1-201ENST00000292478 C9orf139Q6ZV77 190 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 SEPSECSQ9HD40 501 aaKnown RBP10.47□□□□□ -0.73
PTCD1-201ENST00000292478 SIGLEC9Q9Y336 463 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 NDUFA3O95167 84 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 CXCL1P09341 107 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 ARL6IP6Q8N6S5 226 aa10.47□□□□□ -0.73
PTCD1-201ENST00000292478 TRGV2A0A075B6R0 118 aa10.46□□□□□ -0.73
PTCD1-201ENST00000292478 FREM3P0C091 2139 aa10.46□□□□□ -0.73
PTCD1-201ENST00000292478 NTF4P34130 210 aa10.46□□□□□ -0.73
PTCD1-201ENST00000292478 USMG5Q96IX5 58 aa10.46□□□□□ -0.73
PTCD1-201ENST00000292478 PMS2P5A8MQ11 134 aa10.46□□□□□ -0.74
PTCD1-201ENST00000292478 B4DSR2 109 aa10.46□□□□□ -0.74
PTCD1-201ENST00000292478 OR13C6PQ8NH95 151 aa10.46□□□□□ -0.74
PTCD1-201ENST00000292478 TOMM40O96008 361 aa10.46□□□□□ -0.74
PTCD1-201ENST00000292478 Q8TCH9 128 aa10.46□□□□□ -0.74
PTCD1-201ENST00000292478 TRIOBPQ9H2D6 2365 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 CNTFRP26992 372 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 FAM223BA6NKX1 122 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 GATA4P43694 442 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 ACTL10Q5JWF8 245 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 FAM223AQ8IWN6 122 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 PLXNA4Q9HCM2 1894 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 RNASE2P10153 161 aaKnown RBP10.45□□□□□ -0.74
PTCD1-201ENST00000292478 LY6DQ14210 128 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 ST6GALNAC6Q969X2 333 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
PTCD1-201ENST00000292478 BEX4Q9NWD9 120 aaPredicted RBP10.45□□□□□ -0.74
PTCD1-201ENST00000292478 SPCS1Q9Y6A9 102 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 CEP290O15078 2479 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 FBLN7Q53RD9 439 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 IGFL3Q6UXB1 125 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 IGKCP01834 107 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 ZNF138P52744 262 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 ZNF585BQ52M93 769 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 LY6G6EA0A0G2JKS1 128 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
PTCD1-201ENST00000292478 BEND2Q8NDZ0 799 aa10.44□□□□□ -0.74
PTCD1-201ENST00000292478 CHTOPQ9Y3Y2 248 aaKnown RBP10.44□□□□□ -0.74
PTCD1-201ENST00000292478 U3KQA8 63 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms