RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 E5RGE8 158 aa20.22■□□□□ 0.83
SSU72-201ENST00000291386 TSPAN4O14817 238 aa20.22■□□□□ 0.83
SSU72-201ENST00000291386 CD5P06127 495 aa20.22■□□□□ 0.83
SSU72-201ENST00000291386 SULT1A1P50225 295 aa20.22■□□□□ 0.83
SSU72-201ENST00000291386 USF2Q15853 346 aaPredicted RBP20.22■□□□□ 0.83
SSU72-201ENST00000291386 Q8N1Y9 231 aa20.22■□□□□ 0.83
SSU72-201ENST00000291386 RNF2Q99496 336 aa20.22■□□□□ 0.83
SSU72-201ENST00000291386 MED28Q9H204 178 aa20.22■□□□□ 0.83
SSU72-201ENST00000291386 H0YIZ8 118 aa20.21■□□□□ 0.83
SSU72-201ENST00000291386 CFDP00746 253 aaPredicted RBP20.21■□□□□ 0.83
SSU72-201ENST00000291386 APOHP02749 345 aaPredicted RBP20.21■□□□□ 0.83
SSU72-201ENST00000291386 ST8SIA2Q92186 375 aa20.21■□□□□ 0.83
SSU72-201ENST00000291386 TMEM231Q9H6L2 316 aa20.21■□□□□ 0.83
SSU72-201ENST00000291386 SELENOKQ9Y6D0 94 aa20.21■□□□□ 0.83
SSU72-201ENST00000291386 IGHV3-49A0A0A0MS15 119 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 HNRNPCP07910 306 aaKnown RBP eCLIP20.2■□□□□ 0.823e-8■■■□□ 15.9
SSU72-201ENST00000291386 CXCL3P19876 107 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 P2RY1P47900 373 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 RRAS2P62070 204 aaPredicted RBP20.2■□□□□ 0.82
SSU72-201ENST00000291386 GUCA2BQ16661 112 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 LRRC37A5PQ49AS3 106 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 DEFB121Q5J5C9 76 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 FAM90A2PQ658T7 463 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 GTSCR1Q86UQ5 136 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 RNF125Q96EQ8 232 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 SPAG8Q99932 426 aaPredicted RBP20.2■□□□□ 0.82
SSU72-201ENST00000291386 OR5AC2Q9NZP5 309 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 SMAD5-AS1Q9Y6J3 95 aa20.2■□□□□ 0.82
SSU72-201ENST00000291386 IGSF23A1L1A6 192 aa20.19■□□□□ 0.82
SSU72-201ENST00000291386 SMCO3A2RU48 225 aa20.19■□□□□ 0.82
SSU72-201ENST00000291386 MPC2O95563 127 aa20.19■□□□□ 0.82
SSU72-201ENST00000291386 PET100P0DJ07 73 aa20.19■□□□□ 0.82
SSU72-201ENST00000291386 SLC38A11Q08AI6 406 aa20.19■□□□□ 0.82
SSU72-201ENST00000291386 FCN2Q15485 313 aa20.19■□□□□ 0.82
SSU72-201ENST00000291386 STX12Q86Y82 276 aa20.19■□□□□ 0.82
SSU72-201ENST00000291386 NARS2Q96I59 477 aaKnown RBP20.19■□□□□ 0.82
SSU72-201ENST00000291386 IGHV3OR16-13A0A075B7E8 117 aa20.18■□□□□ 0.82
SSU72-201ENST00000291386 IGHV3-74A0A0B4J1X5 117 aa20.18■□□□□ 0.82
SSU72-201ENST00000291386 CST7O76096 145 aa20.18■□□□□ 0.82
SSU72-201ENST00000291386 LILRB2Q8N423 598 aa20.18■□□□□ 0.82
SSU72-201ENST00000291386 OR11H7Q8NGC8 314 aa20.18■□□□□ 0.82
SSU72-201ENST00000291386 RNF126Q9BV68 326 aa20.18■□□□□ 0.82
SSU72-201ENST00000291386 RABAC1Q9UI14 185 aa20.18■□□□□ 0.82
SSU72-201ENST00000291386 S100A11P31949 105 aa20.17■□□□□ 0.82
SSU72-201ENST00000291386 VWC2Q2TAL6 325 aa20.17■□□□□ 0.82
SSU72-201ENST00000291386 TEPPQ6URK8 271 aa20.17■□□□□ 0.82
SSU72-201ENST00000291386 SLC25A31Q9H0C2 315 aa20.17■□□□□ 0.82
SSU72-201ENST00000291386 HBG1P69891 147 aa20.16■□□□□ 0.82
SSU72-201ENST00000291386 HBG2P69892 147 aa20.16■□□□□ 0.82
SSU72-201ENST00000291386 OR2F1Q13607 317 aa20.16■□□□□ 0.82
SSU72-201ENST00000291386 ATP6V1FQ16864 119 aa20.16■□□□□ 0.82
SSU72-201ENST00000291386 BPIFCQ8NFQ6 507 aa20.16■□□□□ 0.82
SSU72-201ENST00000291386 ASB13Q8WXK3 278 aa20.16■□□□□ 0.82
SSU72-201ENST00000291386 A8MZ25 164 aa20.15■□□□□ 0.82
SSU72-201ENST00000291386 NUP62P37198 522 aaPredicted RBP20.15■□□□□ 0.82
SSU72-201ENST00000291386 EIF2B2P49770 351 aaKnown RBP20.15■□□□□ 0.82
SSU72-201ENST00000291386 CD81P60033 236 aa20.15■□□□□ 0.82
SSU72-201ENST00000291386 SELENOTP62341 195 aa20.15■□□□□ 0.82
SSU72-201ENST00000291386 TMEM182Q6ZP80 229 aaPredicted RBP20.15■□□□□ 0.82
SSU72-201ENST00000291386 CYP2G1PQ6ZSU1 146 aa20.15■□□□□ 0.82
SSU72-201ENST00000291386 TCF24Q7RTU0 167 aa20.15■□□□□ 0.82
SSU72-201ENST00000291386 TMEM217Q8N7C4 229 aa20.15■□□□□ 0.82
SSU72-201ENST00000291386 GRAMD2BQ96HH9 432 aa20.15■□□□□ 0.82
SSU72-201ENST00000291386 NEURL2Q9BR09 285 aa20.15■□□□□ 0.82
SSU72-201ENST00000291386 IGHV3-66A0A0C4DH42 116 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 BUB3O43684 328 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 DFFBO76075 338 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 CD7P09564 240 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 LYL1P12980 280 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 BAXQ07812 192 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 C16orf54Q6UWD8 224 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 PFDN2Q9UHV9 154 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 SLC45A2Q9UMX9 530 aa20.14■□□□□ 0.81
SSU72-201ENST00000291386 LYZP61626 148 aa20.13■□□□□ 0.81
SSU72-201ENST00000291386 EWSR1Q01844 656 aaKnown RBP eCLIP20.13■□□□□ 0.812e-7■■□□□ 11.9
SSU72-201ENST00000291386 PBDC1Q9BVG4 233 aa20.13■□□□□ 0.81
SSU72-201ENST00000291386 TMEM147Q9BVK8 224 aa20.13■□□□□ 0.81
SSU72-201ENST00000291386 UQCC1Q9NVA1 299 aa20.13■□□□□ 0.81
SSU72-201ENST00000291386 OR4C46A6NHA9 309 aa20.12■□□□□ 0.81
SSU72-201ENST00000291386 GATA2P23769 480 aaPredicted RBP20.12■□□□□ 0.81
SSU72-201ENST00000291386 PLP1P60201 277 aa20.12■□□□□ 0.81
SSU72-201ENST00000291386 GLMPQ8WWB7 406 aa20.12■□□□□ 0.81
SSU72-201ENST00000291386 C19orf73Q9NVV2 129 aa20.12■□□□□ 0.81
SSU72-201ENST00000291386 WDR83OSQ9Y284 106 aa20.12■□□□□ 0.81
SSU72-201ENST00000291386 TRAV2A0A0B4J234 112 aa20.11■□□□□ 0.81
SSU72-201ENST00000291386 NHLH2Q02577 135 aa20.11■□□□□ 0.81
SSU72-201ENST00000291386 B9D2Q9BPU9 175 aa20.11■□□□□ 0.81
SSU72-201ENST00000291386 MBD2Q9UBB5 411 aa20.11■□□□□ 0.81
SSU72-201ENST00000291386 GIPP09681 153 aaPredicted RBP20.1■□□□□ 0.81
SSU72-201ENST00000291386 IGHV4-30-4P0DP06 118 aa20.1■□□□□ 0.81
SSU72-201ENST00000291386 PAFAH1B2P68402 229 aa20.1■□□□□ 0.81
SSU72-201ENST00000291386 STPG3Q8N7X2 389 aa20.1■□□□□ 0.81
SSU72-201ENST00000291386 FAM110AQ9BQ89 295 aa20.1■□□□□ 0.81
SSU72-201ENST00000291386 HELTA6NFD8 242 aa20.09■□□□□ 0.81
SSU72-201ENST00000291386 AGPAT2O15120 278 aa20.09■□□□□ 0.81
SSU72-201ENST00000291386 AP2S1P53680 142 aaPredicted RBP20.09■□□□□ 0.81
SSU72-201ENST00000291386 C1orf194Q5T5A4 169 aa20.09■□□□□ 0.81
SSU72-201ENST00000291386 ZNF546Q86UE3 836 aa20.09■□□□□ 0.81
SSU72-201ENST00000291386 CHAC2Q8WUX2 184 aa20.09■□□□□ 0.81
SSU72-201ENST00000291386 MGST2Q99735 147 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 281 ms