RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 OR51G1Q8NGK1 321 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 OR1S1Q8NH92 325 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 DTD1Q8TEA8 209 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 PPP1R14BQ96C90 147 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 XCL2Q9UBD3 114 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 RSL24D1Q9UHA3 163 aaKnown RBP10.18□□□□□ -0.78
TPM1-202ENST00000288398 X6R8D5 127 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 PSG1P11464 419 aa10.17□□□□□ -0.78
TPM1-202ENST00000288398 ATP5IP56385 69 aaPredicted RBP10.17□□□□□ -0.78
TPM1-202ENST00000288398 NMSQ5H8A3 153 aa10.17□□□□□ -0.78
TPM1-202ENST00000288398 COQ8AQ8NI60 647 aa10.17□□□□□ -0.78
TPM1-202ENST00000288398 RNF125Q96EQ8 232 aa10.17□□□□□ -0.78
TPM1-202ENST00000288398 LINC00052Q96N35 136 aa10.17□□□□□ -0.78
TPM1-202ENST00000288398 RNF126Q9BV68 326 aa10.17□□□□□ -0.78
TPM1-202ENST00000288398 ELOA3CA0A087WX78 387 aaPredicted RBP10.16□□□□□ -0.78
TPM1-202ENST00000288398 DEFB131BA0A096LNP1 70 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 A0A0B4J2A0 478 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 BUB3O43684 328 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 FAUP35544 74 aaKnown RBP10.16□□□□□ -0.78
TPM1-202ENST00000288398 NKX2-1P43699 371 aaPredicted RBP10.16□□□□□ -0.78
TPM1-202ENST00000288398 PRR20EP86478 221 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 PRR20CP86479 221 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 PRR20DP86480 221 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 PRR20BP86481 221 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 PRR20AP86496 221 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 SPCS2Q15005 226 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 OR8G2PQ6IF36 304 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 RAB2BQ8WUD1 216 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 RBKSQ9H477 322 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 CCDC59Q9P031 241 aaKnown RBP10.16□□□□□ -0.78
TPM1-202ENST00000288398 SHPKQ9UHJ6 478 aa10.16□□□□□ -0.78
TPM1-202ENST00000288398 PAIP2BQ9ULR5 123 aaKnown RBP10.16□□□□□ -0.78
TPM1-202ENST00000288398 ANKRD20A5PA0PJZ0 165 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 H3BMM0 161 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 HLA-DRB4P13762 266 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 LYZP61626 148 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 RAB11AP62491 216 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 CSNK1G2-AS1Q8NCQ2 148 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 NDUFAF3Q9BU61 184 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 PRR13Q9NZ81 148 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 HSPB7Q9UBY9 170 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.78
TPM1-202ENST00000288398 IGHV3OR16-12A0A075B7B8 117 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 TMEM189A5PLL7 270 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 SNRPGP15A8MWD9 76 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 IGKV3-20P01619 116 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 P0DMU3 169 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 FAM231AP0DMU4 169 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 FAM231CP0DMU5 169 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
TPM1-202ENST00000288398 EMP1P54849 157 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 EBLN2Q6P2I7 272 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 ZNF767PQ75MW2 155 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 LYZL2Q7Z4W2 148 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 TMEM170AQ8WVE7 144 aa10.14□□□□□ -0.79
TPM1-202ENST00000288398 TEX48A0A1B0GUV7 120 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 FABP12A6NFH5 140 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 AMBPP02760 352 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 SPART-AS1P0CW21 52 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 S100A7P31151 101 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 PSMB3P49720 205 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 AP3S2P59780 193 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 SUPT4H1P63272 117 aaKnown RBP10.13□□□□□ -0.79
TPM1-202ENST00000288398 RPP30P78346 268 aaKnown RBP10.13□□□□□ -0.79
TPM1-202ENST00000288398 C1orf194Q5T5A4 169 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 SAMD13Q5VXD3 122 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 TMED4Q7Z7H5 227 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 OR8I2Q8N0Y5 310 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 OR4B1Q8NGF8 309 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 BCL7BQ9BQE9 202 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 CELA1Q9UNI1 258 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 AGRNO00468 2067 aa10.13□□□□□ -0.79
TPM1-202ENST00000288398 DUXBA0A1W2PPF3 345 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 SMIM9A6NGZ8 99 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 MED6O75586 246 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 ALDH3B2P48448 385 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 TMBIM6P55061 237 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 GAMTQ14353 236 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 C12orf74Q32Q52 190 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 SPATA31B1PQ5VZV4 182 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 LINC00336Q6ZUF6 198 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 C7orf50Q9BRJ6 194 aaKnown RBP10.12□□□□□ -0.79
TPM1-202ENST00000288398 GOLT1BQ9Y3E0 138 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 RFNGQ9Y644 331 aa10.12□□□□□ -0.79
TPM1-202ENST00000288398 CFDP00746 253 aaPredicted RBP10.11□□□□□ -0.79
TPM1-202ENST00000288398 VAMP1P23763 118 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 MEOX2P50222 304 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 FXYD7P58549 80 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 ZNF90Q03938 601 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 OR2F1Q13607 317 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 DYNC2LI1Q8TCX1 351 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 CIB3Q96Q77 187 aaPredicted RBP10.11□□□□□ -0.79
TPM1-202ENST00000288398 NEU1Q99519 415 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
TPM1-202ENST00000288398 FRAS1Q86XX4 4008 aa10.11□□□□□ -0.79
TPM1-202ENST00000288398 KMT2AQ03164 3969 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 ISLRO14498 428 aa10.1□□□□□ -0.79
TPM1-202ENST00000288398 IFNA21P01568 189 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms