RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 USF2Q15853 346 aaPredicted RBP18.74■□□□□ 0.59
PDF-201ENST00000288022 OR8G2PQ6IF36 304 aa18.74■□□□□ 0.59
PDF-201ENST00000288022 LINC00322Q6ZN03 302 aaPredicted RBP18.74■□□□□ 0.59
PDF-201ENST00000288022 WFDC3Q8IUB2 231 aa18.74■□□□□ 0.59
PDF-201ENST00000288022 RAB40CQ96S21 281 aa18.74■□□□□ 0.59
PDF-201ENST00000288022 PBDC1Q9BVG4 233 aa18.74■□□□□ 0.59
PDF-201ENST00000288022 IGKV1D-37A0A075B6S9 117 aa18.73■□□□□ 0.59
PDF-201ENST00000288022 MBPP02686 304 aaPredicted RBP18.73■□□□□ 0.59
PDF-201ENST00000288022 AKR1C1Q04828 323 aa18.73■□□□□ 0.59
PDF-201ENST00000288022 ODF3L2Q3SX64 289 aa18.73■□□□□ 0.59
PDF-201ENST00000288022 WWC2-AS2Q96NR7 200 aa18.73■□□□□ 0.59
PDF-201ENST00000288022 SPATA25Q9BR10 227 aa18.73■□□□□ 0.59
PDF-201ENST00000288022 RABAC1Q9UI14 185 aa18.73■□□□□ 0.59
PDF-201ENST00000288022 RCL1Q9Y2P8 373 aaKnown RBP18.73■□□□□ 0.59
PDF-201ENST00000288022 PAX9P55771 341 aa18.72■□□□□ 0.59
PDF-201ENST00000288022 OR2F1Q13607 317 aa18.72■□□□□ 0.59
PDF-201ENST00000288022 GSG1LQ6UXU4 331 aa18.72■□□□□ 0.59
PDF-201ENST00000288022 ACOT7LQ6ZUV0 252 aa18.72■□□□□ 0.59
PDF-201ENST00000288022 RNF125Q96EQ8 232 aa18.72■□□□□ 0.59
PDF-201ENST00000288022 C2orf50Q96LR7 162 aa18.72■□□□□ 0.59
PDF-201ENST00000288022 TRGV9Q99603 122 aa18.72■□□□□ 0.59
PDF-201ENST00000288022 MS4A6AQ9H2W1 248 aa18.72■□□□□ 0.59
PDF-201ENST00000288022 LSM5Q9Y4Y9 91 aaKnown RBP18.72■□□□□ 0.59
PDF-201ENST00000288022 SMCO3A2RU48 225 aa18.71■□□□□ 0.59
PDF-201ENST00000288022 L7N2F9 121 aa18.71■□□□□ 0.59
PDF-201ENST00000288022 TAS2R30P59541 319 aa18.71■□□□□ 0.59
PDF-201ENST00000288022 VAMP2P63027 116 aa18.71■□□□□ 0.59
PDF-201ENST00000288022 CITED4Q96RK1 184 aa18.71■□□□□ 0.59
PDF-201ENST00000288022 LOC102724200A0A096LPH7 203 aaPredicted RBP18.7■□□□□ 0.58
PDF-201ENST00000288022 INMT-MINDY4F8WBC2 141 aa18.7■□□□□ 0.58
PDF-201ENST00000288022 METTL15P1P0C7V9 234 aa18.7■□□□□ 0.58
PDF-201ENST00000288022 EIF2B2P49770 351 aaKnown RBP18.7■□□□□ 0.58
PDF-201ENST00000288022 CMC4P56277 68 aaPredicted RBP18.7■□□□□ 0.58
PDF-201ENST00000288022 LYZP61626 148 aa18.7■□□□□ 0.58
PDF-201ENST00000288022 THAP8Q8NA92 274 aa18.7■□□□□ 0.58
PDF-201ENST00000288022 STXBP6Q8NFX7 210 aa18.7■□□□□ 0.58
PDF-201ENST00000288022 GGTLC1Q9BX51 225 aa18.7■□□□□ 0.58
PDF-201ENST00000288022 U3KQE9 123 aa18.7■□□□□ 0.58
PDF-201ENST00000288022 IGKV1OR2-108A0A075B7D4 117 aa18.69■□□□□ 0.58
PDF-201ENST00000288022 SNRPGP15A8MWD9 76 aa18.69■□□□□ 0.58
PDF-201ENST00000288022 TSC22D2O75157 780 aa18.69■□□□□ 0.58
PDF-201ENST00000288022 TMEM14EPQ6UXP3 125 aa18.69■□□□□ 0.58
PDF-201ENST00000288022 FAM110AQ9BQ89 295 aa18.69■□□□□ 0.58
PDF-201ENST00000288022 C7orf66A4D0T2 115 aa18.68■□□□□ 0.58
PDF-201ENST00000288022 HELTA6NFD8 242 aa18.68■□□□□ 0.58
PDF-201ENST00000288022 PRAF2O60831 178 aa18.68■□□□□ 0.58
PDF-201ENST00000288022 CCNKO75909 580 aa18.68■□□□□ 0.58
PDF-201ENST00000288022 RRAS2P62070 204 aaPredicted RBP18.68■□□□□ 0.58
PDF-201ENST00000288022 C16orf54Q6UWD8 224 aa18.68■□□□□ 0.58
PDF-201ENST00000288022 APRG1Q8IVJ8 170 aa18.68■□□□□ 0.58
PDF-201ENST00000288022 RETNQ9HD89 108 aa18.68■□□□□ 0.58
PDF-201ENST00000288022 PFDN2Q9UHV9 154 aa18.68■□□□□ 0.58
PDF-201ENST00000288022 TRAV2A0A0B4J234 112 aa18.67■□□□□ 0.58
PDF-201ENST00000288022 PMS2P5A8MQ11 134 aa18.67■□□□□ 0.58
PDF-201ENST00000288022 K7EPK0 472 aa18.67■□□□□ 0.58
PDF-201ENST00000288022 S100A10P60903 97 aa18.67■□□□□ 0.58
PDF-201ENST00000288022 OR10P1Q8NGE3 313 aa18.67■□□□□ 0.58
PDF-201ENST00000288022 MAP6D1Q9H9H5 199 aa18.67■□□□□ 0.58
PDF-201ENST00000288022 NUP62P37198 522 aaPredicted RBP18.66■□□□□ 0.58
PDF-201ENST00000288022 BCAP31P51572 246 aa18.66■□□□□ 0.58
PDF-201ENST00000288022 TMEM144Q7Z5S9 345 aa18.66■□□□□ 0.58
PDF-201ENST00000288022 GLMPQ8WWB7 406 aa18.66■□□□□ 0.58
PDF-201ENST00000288022 PPP1R14BQ96C90 147 aa18.66■□□□□ 0.58
PDF-201ENST00000288022 MARVELD1Q9BSK0 173 aa18.66■□□□□ 0.58
PDF-201ENST00000288022 BUB3O43684 328 aa18.65■□□□□ 0.58
PDF-201ENST00000288022 PVALBP20472 110 aaPredicted RBP18.65■□□□□ 0.58
PDF-201ENST00000288022 AP2S1P53680 142 aaPredicted RBP18.65■□□□□ 0.58
PDF-201ENST00000288022 DLK1P80370 383 aa18.65■□□□□ 0.58
PDF-201ENST00000288022 ZNF124Q15973 351 aa18.65■□□□□ 0.58
PDF-201ENST00000288022 MGAT4CQ9UBM8 478 aa18.65■□□□□ 0.58
PDF-201ENST00000288022 GOSR2O14653 212 aa18.64■□□□□ 0.57
PDF-201ENST00000288022 CFDP00746 253 aaPredicted RBP18.64■□□□□ 0.57
PDF-201ENST00000288022 RPL35AP18077 110 aaKnown RBP18.64■□□□□ 0.57
PDF-201ENST00000288022 CAV2P51636 162 aa18.64■□□□□ 0.57
PDF-201ENST00000288022 APOC4P55056 127 aa18.64■□□□□ 0.57
PDF-201ENST00000288022 FAM24BQ8N5W8 94 aa18.64■□□□□ 0.57
PDF-201ENST00000288022 BPIFCQ8NFQ6 507 aa18.64■□□□□ 0.57
PDF-201ENST00000288022 K7EQG2 157 aa18.63■□□□□ 0.57
PDF-201ENST00000288022 DEFB131AP59861 70 aa18.63■□□□□ 0.57
PDF-201ENST00000288022 RAB32Q13637 225 aa18.63■□□□□ 0.57
PDF-201ENST00000288022 SIGLEC15Q6ZMC9 328 aa18.63■□□□□ 0.57
PDF-201ENST00000288022 SIX6O95475 246 aa18.62■□□□□ 0.57
PDF-201ENST00000288022 GATA2P23769 480 aaPredicted RBP18.62■□□□□ 0.57
PDF-201ENST00000288022 NPVFQ9HCQ7 196 aa18.62■□□□□ 0.57
PDF-201ENST00000288022 ARL16Q0P5N6 197 aa18.61■□□□□ 0.57
PDF-201ENST00000288022 LEMD1Q68G75 181 aa18.61■□□□□ 0.57
PDF-201ENST00000288022 CYP2G1PQ6ZSU1 146 aa18.61■□□□□ 0.57
PDF-201ENST00000288022 DCANP1Q8TF63 244 aa18.61■□□□□ 0.57
PDF-201ENST00000288022 FAM24AA6NFZ4 105 aa18.6■□□□□ 0.57
PDF-201ENST00000288022 FNDC10F2Z333 226 aa18.6■□□□□ 0.57
PDF-201ENST00000288022 SSNA1O43805 119 aa18.6■□□□□ 0.57
PDF-201ENST00000288022 ZNF688P0C7X2 276 aa18.6■□□□□ 0.57
PDF-201ENST00000288022 ORM2P19652 201 aa18.6■□□□□ 0.57
PDF-201ENST00000288022 IL15RAQ13261 267 aa18.6■□□□□ 0.57
PDF-201ENST00000288022 TMEM182Q6ZP80 229 aaPredicted RBP18.6■□□□□ 0.57
PDF-201ENST00000288022 STPG3Q8N7X2 389 aa18.59■□□□□ 0.57
PDF-201ENST00000288022 OR1B1Q8NGR6 318 aa18.59■□□□□ 0.57
PDF-201ENST00000288022 C11orf1Q9H5F2 150 aa18.59■□□□□ 0.57
PDF-201ENST00000288022 NRN1Q9NPD7 142 aa18.59■□□□□ 0.57
PDF-201ENST00000288022 FBXL17Q9UF56 701 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms