RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CA7P43166 264 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 AMMECR1LQ6DCA0 310 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 ZNF833PQ6ZTB9 187 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 ZNRF1Q8ND25 227 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 SMIM12Q96EX1 92 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 OR2T8A6NH00 312 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 C8orf88P0DMB2 117 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 RNASE2P10153 161 aaKnown RBP8.42□□□□□ -1.06
SKA1-201ENST00000285116 RPL8P62917 257 aaKnown RBP8.42□□□□□ -1.06
SKA1-201ENST00000285116 TEX36Q5VZQ5 186 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 FAM71F2Q6NXP2 309 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 ERASQ7Z444 233 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 SPATA12Q7Z6I5 190 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 MOGAT3Q86VF5 341 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 OR4A5Q8NH83 315 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 OSR1Q8TAX0 266 aaPredicted RBP8.42□□□□□ -1.06
SKA1-201ENST00000285116 MBD6Q96DN6 1003 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 GRAMD2BQ96HH9 432 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 SLC25A33Q9BSK2 321 aa8.42□□□□□ -1.06
SKA1-201ENST00000285116 RPUSD1Q9UJJ7 312 aaKnown RBP8.42□□□□□ -1.06
SKA1-201ENST00000285116 ABCA12Q86UK0 2595 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 IGKV1OR2-108A0A075B7D4 117 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 TEX50A0A1B0GTY4 177 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 CD5LO43866 347 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 OR7C2O60412 319 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 COL8A2P25067 703 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 CD69Q07108 199 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 FAM168AQ92567 244 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 ST6GALNAC6Q969X2 333 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 GAFA1Q96PS6 74 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 CHRDL1Q9BU40 450 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 RNF7Q9UBF6 113 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 IGHV3OR15-7A0A075B7D8 119 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 CT45A6P0DMU7 189 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 CT45A5P0DMU8 189 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 CT45A7P0DMV0 189 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 GDF5OSQ5U4N7 250 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 ZNF788Q6ZQV5 615 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 KIR3DL3Q8N743 410 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 C8orf31Q8N9H6 132 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 NUP35Q8NFH5 326 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 FAM167A-AS1Q96KT0 104 aa8.41□□□□□ -1.06
SKA1-201ENST00000285116 SSBP3Q9BWW4 388 aaPredicted RBP8.41□□□□□ -1.06
SKA1-201ENST00000285116 MUC21A0A0G2JKD1 596 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 MUC21A0A140T8X8 626 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 GAGE12BA1L429 117 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 CEACAM4O75871 244 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 HLA-DRB1P01911 266 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 MUC21Q5SSG8 566 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 ATP5L2Q7Z4Y8 100 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 CLEC5AQ9NY25 188 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 DSCAMO60469 2012 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 SYS1-DBNDD2H3BUS1 97 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 UTF1Q5T230 341 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 PET117Q6UWS5 81 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 FDCSPQ8NFU4 85 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 OR2T6Q8NHC8 308 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 ITLN1Q8WWA0 313 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 NUDT11Q96G61 164 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 NDUFA4L2Q9NRX3 87 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 ZNF355PQ9NSJ1 428 aa8.4□□□□□ -1.06
SKA1-201ENST00000285116 VSTM5A8MXK1 200 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 PSG9Q00887 426 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 MEF2CQ06413 473 aaPredicted RBP8.4□□□□□ -1.07
SKA1-201ENST00000285116 TMEM177Q53S58 311 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 SPRNQ5BIV9 151 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 FAM120AOSQ5T036 256 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 PVRIGQ6DKI7 326 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 IGF2-ASQ6U949 168 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 SEM1Q6ZVN7 128 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 SLC25A2Q9BXI2 301 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 TMEM191AQ9H0A3 160 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 PEF1Q9UBV8 284 aaKnown RBP8.4□□□□□ -1.07
SKA1-201ENST00000285116 MSRB2Q9Y3D2 182 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 LINC00312Q9Y6C7 94 aa8.4□□□□□ -1.07
SKA1-201ENST00000285116 CACNA1DQ01668 2161 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 USP9XQ93008 2570 aaPredicted RBP8.39□□□□□ -1.07
SKA1-201ENST00000285116 TMEM238C9JI98 176 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 GPR6P46095 362 aaPredicted RBP8.39□□□□□ -1.07
SKA1-201ENST00000285116 THAP8Q8NA92 274 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 NHLRC2Q8NBF2 726 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 CHCHD1Q96BP2 118 aaKnown RBP8.39□□□□□ -1.07
SKA1-201ENST00000285116 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 TP73-AS1Q9UF72 201 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
SKA1-201ENST00000285116 hDV102S1A0JD36 115 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 HIST1H1AQ02539 215 aaPredicted RBP8.39□□□□□ -1.07
SKA1-201ENST00000285116 SNRNP40Q96DI7 357 aaKnown RBP8.39□□□□□ -1.07
SKA1-201ENST00000285116 PLPPR2Q96GM1 343 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 SCRT2Q9NQ03 307 aa8.39□□□□□ -1.07
SKA1-201ENST00000285116 OR5AN1Q8NGI8 311 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 OR1L4Q8NGR5 311 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 SSBP4Q9BWG4 385 aaPredicted RBP8.38□□□□□ -1.07
SKA1-201ENST00000285116 MS4A6AQ9H2W1 248 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 CELSR2Q9HCU4 2923 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 HIVEP3Q5T1R4 2406 aa8.38□□□□□ -1.07
SKA1-201ENST00000285116 PLCE1Q9P212 2302 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms