RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ARHGAP21Q5T5U3 1957 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 CUL9Q8IWT3 2517 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 GZMMP51124 257 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 FOXL1Q12952 345 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 TMEM144Q7Z5S9 345 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 SLC25A39Q9BZJ4 359 aaPredicted RBP7.31□□□□□ -1.24
NIPBL-201ENST00000282516 ARHGAP32A7KAX9 2087 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 CENPVL1A0A0U1RR11 272 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 CCL1P22362 96 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 TMEM258P61165 79 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 RPL36AP83881 106 aaKnown RBP7.31□□□□□ -1.24
NIPBL-201ENST00000282516 OR10W1Q8NGF6 305 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 RPL36ALQ969Q0 106 aaKnown RBP7.31□□□□□ -1.24
NIPBL-201ENST00000282516 IQCF6A8MYZ5 107 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 IL9P15248 144 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 TMEM52Q8NDY8 209 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 RSPO3Q9BXY4 272 aaPredicted RBP7.31□□□□□ -1.24
NIPBL-201ENST00000282516 NEGR1Q7Z3B1 354 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 ZNF114Q8NC26 417 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 IGHV2OR16-5A0A0B4J2B6 119 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.3□□□□□ -1.24
NIPBL-201ENST00000282516 LINC01560Q8TB33 94 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 SS18Q15532 418 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 MUC4Q99102 2169 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 TAF1LQ8IZX4 1826 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 LTBP4Q8N2S1 1624 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 CECR9P0C854 216 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 RPL23P62829 140 aaKnown RBP7.3□□□□□ -1.24
NIPBL-201ENST00000282516 ZXDCQ2QGD7 858 aaPredicted RBP7.3□□□□□ -1.24
NIPBL-201ENST00000282516 AMELYQ99218 206 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 RCHY1Q96PM5 261 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 OTOGLQ3ZCN5 2332 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 SOCS3O14543 225 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 ZNF525Q8N782 197 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 NKAPP1Q8N9T2 125 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 UBE2WQ96B02 151 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 TMEM126AQ9H061 195 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 TRAV8-3A0A0A6YYJ7 113 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 UMODP07911 640 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 NRTNQ99748 197 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 TRGV1A0A0A0MS02 117 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 IGFBP3P17936 291 aaPredicted RBP7.3□□□□□ -1.24
NIPBL-201ENST00000282516 TCTEX1D4Q5JR98 221 aa7.3□□□□□ -1.24
NIPBL-201ENST00000282516 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.3□□□□□ -1.24
NIPBL-201ENST00000282516 TNFSF13O75888 250 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 NCR2O95944 276 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 PAX8Q06710 450 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 TPTE2P1Q5T6R2 138 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 BCL6BQ8N143 479 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-201ENST00000282516 FAM166AQ6J272 317 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 C1QTNF4Q9BXJ3 329 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 GTSF1LQ9H1H1 148 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 CACNA1AO00555 2505 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 CSPG4Q6UVK1 2322 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 UBE2CO00762 179 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 PSG8Q9UQ74 426 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 NEUROG3Q9Y4Z2 214 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 A0A0G2JMM0 328 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 A0A1W2PPB8 328 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 KIR3DP1A8MWS1 328 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 PATE3B3GLJ2 98 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 IMMP1LQ96LU5 166 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 C6orf226Q5I0X4 101 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 TMEM133Q9H2Q1 129 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 VCYO14598 125 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 C1QTNF9P0C862 333 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 TMEM8BA6NDV4 472 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 KIR3DS1Q14943 382 aa7.29□□□□□ -1.24
NIPBL-201ENST00000282516 UBR3Q6ZT12 1888 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 IFITM3Q01628 133 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 CDCP2Q5VXM1 449 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 C1orf122Q6ZSJ8 110 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 TRACP01848 142 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 C1orf53Q5VUE5 145 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 FAM216BQ8N7L0 139 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 GUSBP1Q15486 140 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 NSUN5P1Q3KNT7 163 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 SPRED2Q7Z698 418 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 MLNRO43193 412 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 BHLHA9Q7RTU4 235 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 C1orf159Q96HA4 380 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 IGKV1-8A0A0C4DH67 115 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 WNT2P09544 360 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 ZNF124Q15973 351 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 SAP30O75446 220 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 TMEM242Q9NWH2 141 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 D6R8Y8 96 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 TEX38Q6PEX7 206 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 ADAMTSL5Q6ZMM2 481 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 RPRMLQ8N4K4 120 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 FAM181AQ8N9Y4 354 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 C8orf46Q8TAG6 207 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 ZNF625Q96I27 306 aaPredicted RBP7.28□□□□□ -1.24
NIPBL-201ENST00000282516 C18orf12Q96KH6 178 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 PILRAQ9UKJ1 303 aa7.28□□□□□ -1.24
NIPBL-201ENST00000282516 EREGO14944 169 aa7.27□□□□□ -1.24
NIPBL-201ENST00000282516 CRYBA2P53672 197 aa7.27□□□□□ -1.24
NIPBL-201ENST00000282516 EGR2P11161 476 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-201ENST00000282516 HIST1H2BLQ99880 126 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms