RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 INS-IGF2F8WCM5 200 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 I3L2K1 104 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 FSHBP01225 129 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 OR1P1Q8NH06 330 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 LYPD6BQ8NI32 183 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 PSMG3Q9BT73 122 aaPredicted RBP9.19□□□□□ -0.94
SSRP1-201ENST00000278412 PRO1933Q9H354 126 aa9.19□□□□□ -0.94
SSRP1-201ENST00000278412 NDUFB8O95169 186 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 TMEM41BQ5BJD5 291 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 UNQ5815/PRO19632Q6UWF5 114 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 FAM24BQ8N5W8 94 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 ZNF709Q8N972 641 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 TRAV5A0A0B4J249 113 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 HLA-DRB1P01911 266 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 TMEM144Q7Z5S9 345 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 CENPVQ7Z7K6 275 aaPredicted RBP9.18□□□□□ -0.94
SSRP1-201ENST00000278412 OR5R1Q8NH85 324 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 TMEM37Q8WXS4 190 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 YPEL4Q96NS1 127 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 SLC45A2Q9UMX9 530 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 ZFP92A6NM28 416 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 A8MWP6 167 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 GATA3P23771 443 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 COTL1Q14019 142 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 USF2Q15853 346 aaPredicted RBP9.18□□□□□ -0.94
SSRP1-201ENST00000278412 MIR17HGQ75NE6 70 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 PARD6GQ9BYG4 376 aaPredicted RBP9.18□□□□□ -0.94
SSRP1-201ENST00000278412 GPR61Q9BZJ8 451 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 ZNF355PQ9NSJ1 428 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 GNG13Q9P2W3 67 aa9.18□□□□□ -0.94
SSRP1-201ENST00000278412 MAP1LC3B2A6NCE7 125 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
SSRP1-201ENST00000278412 HOXA3O43365 443 aaPredicted RBP9.17□□□□□ -0.94
SSRP1-201ENST00000278412 PRR20EP86478 221 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 PRR20CP86479 221 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 PRR20DP86480 221 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 PRR20BP86481 221 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 PRR20AP86496 221 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 LEMD1Q68G75 181 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 ZNF114Q8NC26 417 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 MAP1LC3BQ9GZQ8 125 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 SLC39A9Q9NUM3 307 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 MOB4Q9Y3A3 225 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 MAST4O15021 2626 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 TENM1Q9UKZ4 2725 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 CRYGCP07315 174 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 NDUFA6P56556 154 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 TIGITQ495A1 244 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 PVRIGQ6DKI7 326 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 ZNF329Q86UD4 541 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 SLC35E1Q96K37 410 aa9.17□□□□□ -0.94
SSRP1-201ENST00000278412 IGLV11-55A0A075B6I3 123 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 ELOA3CA0A087WX78 387 aaPredicted RBP9.16□□□□□ -0.94
SSRP1-201ENST00000278412 UMAD1C9J7I0 102 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 IER3P46695 156 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 CEBPGP53567 150 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 SERF2P84101 59 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 SRSF2Q01130 221 aaKnown RBP9.16□□□□□ -0.94
SSRP1-201ENST00000278412 RHEBQ15382 184 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 EIF5A2Q9GZV4 153 aaKnown RBP9.16□□□□□ -0.94
SSRP1-201ENST00000278412 C2CD3Q4AC94 2353 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 CYSRT1A8MQ03 144 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 G0S2P27469 103 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 SUB1P53999 127 aaKnown RBP eCLIP9.16□□□□□ -0.944e-8■■■□□ 18.6
SSRP1-201ENST00000278412 GUK1Q16774 197 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 PATE2Q6UY27 113 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 SGMS2Q8NHU3 365 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 RNASEH2CQ8TDP1 164 aaKnown RBP9.16□□□□□ -0.94
SSRP1-201ENST00000278412 FOXC2Q99958 501 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 KLK15Q9H2R5 256 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 C1RLQ9NZP8 487 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 TIMM9Q9Y5J7 89 aa9.16□□□□□ -0.94
SSRP1-201ENST00000278412 IGKV1-17P01599 117 aa9.15□□□□□ -0.94
SSRP1-201ENST00000278412 UBE2G2P60604 165 aa9.15□□□□□ -0.94
SSRP1-201ENST00000278412 HIST3H2BBQ8N257 126 aa9.15□□□□□ -0.94
SSRP1-201ENST00000278412 SIGLECL1Q8N7X8 197 aa9.15□□□□□ -0.94
SSRP1-201ENST00000278412 OR2T8A6NH00 312 aa9.15□□□□□ -0.94
SSRP1-201ENST00000278412 J3QLI3 93 aa9.15□□□□□ -0.94
SSRP1-201ENST00000278412 TTC9CQ8N5M4 171 aa9.15□□□□□ -0.94
SSRP1-201ENST00000278412 YAE1D1Q9NRH1 226 aa9.15□□□□□ -0.94
SSRP1-201ENST00000278412 H3BTX0 84 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 EREGO14944 169 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 OR10J4P0C629 311 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 IGLC1P0CG04 106 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 ORM2P19652 201 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 CDC34P49427 236 aaPredicted RBP9.14□□□□□ -0.95
SSRP1-201ENST00000278412 GAGE1Q13065 139 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 KHDC3LQ587J8 217 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 FAM78BQ5VT40 261 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 CYP2G1PQ6ZSU1 146 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 SELENOKQ9Y6D0 94 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 PSMB11A5LHX3 300 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 C17orf112F2Z3M2 114 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 LINC00614P0C842 121 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 CACNG8Q8WXS5 425 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 ZNF503Q96F45 646 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 CHRDL1Q9BU40 450 aa9.14□□□□□ -0.95
SSRP1-201ENST00000278412 FBXL7Q9UJT9 491 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms