RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 LYPD2Q6UXB3 125 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 CHTOPQ9Y3Y2 248 aaKnown RBP9.78□□□□□ -0.84
SHPRH-201ENST00000275233 FAM186AA6NE01 2351 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 OR5A1Q8NGJ0 315 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 PEF1Q9UBV8 284 aaKnown RBP9.78□□□□□ -0.84
SHPRH-201ENST00000275233 KIF26BQ2KJY2 2108 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 PSPNO60542 156 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 IL18BPO95998 194 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 DSCR9P59020 149 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 PAX2Q02962 417 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 PSCAO43653 123 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 NCR2O95944 276 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 RUSC1-AS1Q66K80 236 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 Q6AWC8 147 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 OCC1Q8TAD7 63 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 TMEM8BA6NDV4 472 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 RNF223E7ERA6 249 aa9.77□□□□□ -0.84
SHPRH-201ENST00000275233 CCL1P22362 96 aa9.77□□□□□ -0.84
SHPRH-201ENST00000275233 FOXL1Q12952 345 aa9.77□□□□□ -0.84
SHPRH-201ENST00000275233 SLC25A15Q9Y619 301 aa9.77□□□□□ -0.84
SHPRH-201ENST00000275233 CCL20P78556 96 aa9.77□□□□□ -0.84
SHPRH-201ENST00000275233 PIP4P2Q8N4L2 257 aa9.77□□□□□ -0.84
SHPRH-201ENST00000275233 GFI1Q99684 422 aa9.77□□□□□ -0.84
SHPRH-201ENST00000275233 BPESC1Q9GZL8 116 aa9.77□□□□□ -0.84
SHPRH-201ENST00000275233 NAPSAO96009 420 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 PSG1P11464 419 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 CRYGSP22914 178 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 MST1P26927 711 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 ATRAIDQ6UW56 229 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 SLC25A39Q9BZJ4 359 aaPredicted RBP9.77□□□□□ -0.85
SHPRH-201ENST00000275233 GREB1LQ9C091 1923 aaPredicted RBP9.77□□□□□ -0.85
SHPRH-201ENST00000275233 COL4A6Q14031 1691 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 A0A0G2JMZ2 1700 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 LRRC37A2A6NM11 1700 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 TMEM249Q2WGJ8 235 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 RNF182Q8N6D2 247 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 NABP1Q96AH0 204 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 B4DSR2 109 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 PRADC1Q9BSG0 188 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 RPUSD1Q9UJJ7 312 aaKnown RBP9.77□□□□□ -0.85
SHPRH-201ENST00000275233 MPDZO75970 2070 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 BTCP35070 178 aa9.77□□□□□ -0.85
SHPRH-201ENST00000275233 CD300EQ496F6 205 aaPredicted RBP9.77□□□□□ -0.85
SHPRH-201ENST00000275233 ZNF362Q5T0B9 420 aaPredicted RBP9.77□□□□□ -0.85
SHPRH-201ENST00000275233 NRN1Q9NPD7 142 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 NHP2Q9NX24 153 aaKnown RBP9.76□□□□□ -0.85
SHPRH-201ENST00000275233 CYSLTR1Q9Y271 337 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 A0A087WX48 190 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 DTX2Q86UW9 622 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 C3orf56Q8N813 242 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 Q8TAT8 98 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 A0A1B0GW15 77 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 YLPM1P49750 1951 aaKnown RBP9.76□□□□□ -0.85
SHPRH-201ENST00000275233 SBF1O95248 1867 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 HBDP02042 147 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 CKS1BP61024 79 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 OVOL1O14753 267 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 SP5Q6BEB4 398 aaPredicted RBP9.76□□□□□ -0.85
SHPRH-201ENST00000275233 FNDC4Q9H6D8 234 aaPredicted RBP9.76□□□□□ -0.85
SHPRH-201ENST00000275233 RFNGQ9Y644 331 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 SPCS1Q9Y6A9 102 aa9.76□□□□□ -0.85
SHPRH-201ENST00000275233 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 RNF144BQ7Z419 303 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 ZNF581Q9P0T4 197 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 SRRM4A7MD48 611 aaKnown RBP9.75□□□□□ -0.85
SHPRH-201ENST00000275233 DMRTC2Q8IXT2 367 aaPredicted RBP9.75□□□□□ -0.85
SHPRH-201ENST00000275233 ZNRD1Q9P1U0 126 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 DMRT1Q9Y5R6 373 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 H0YIZ8 118 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 H3BUT2 72 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 FREM3P0C091 2139 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 GAFA1Q96PS6 74 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 SRRM5B3KS81 715 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 DPM2O94777 84 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 SRSF4Q08170 494 aaKnown RBP9.75□□□□□ -0.85
SHPRH-201ENST00000275233 NIT1Q86X76 327 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 LINC00518Q8N0U6 118 aa9.75□□□□□ -0.85
SHPRH-201ENST00000275233 TCF20Q9UGU0 1960 aaKnown RBP9.74□□□□□ -0.85
SHPRH-201ENST00000275233 PHLDA1Q8WV24 401 aaPredicted RBP9.74□□□□□ -0.85
SHPRH-201ENST00000275233 LTBP1Q14766 1721 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 BUB1B-PAK6H3BSN5 160 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 TCRAP04437 139 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 TREML4Q6UXN2 200 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 C20orf204Q6ZNR8 217 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 CRIPAKQ8N1N5 446 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 HGFACQ04756 655 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 CLPSP04118 112 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 LY6G6FQ5SQ64 297 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 CST9LQ9H4G1 147 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 CARHSP1Q9Y2V2 147 aaKnown RBP9.74□□□□□ -0.85
SHPRH-201ENST00000275233 TRAV8-2A0A0B4J237 113 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 CFHR3Q02985 330 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 ZNF876PQ49A33 203 aa9.74□□□□□ -0.85
SHPRH-201ENST00000275233 LSM4Q9Y4Z0 139 aaKnown RBP9.74□□□□□ -0.85
SHPRH-201ENST00000275233 MGST2Q99735 147 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 J3QRE1 110 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 HEPN1Q6WQI6 88 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 SLC25A48Q6ZT89 311 aaKnown RBP9.73□□□□□ -0.85
SHPRH-201ENST00000275233 IGKCP01834 107 aa9.73□□□□□ -0.85
SHPRH-201ENST00000275233 LINC01356Q8N9X3 169 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms