RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 IQCF2Q8IXL9 164 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 CYB561D1Q8N8Q1 229 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 NECAP1Q8NC96 275 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 SUN5Q8TC36 379 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 DOK5Q9P104 306 aa12.79□□□□□ -0.36
TPM1-201ENST00000267996 ZFHX3Q15911 3703 aa12.78□□□□□ -0.36
TPM1-201ENST00000267996 HYPMO75409 117 aa12.78□□□□□ -0.36
TPM1-201ENST00000267996 SCO1O75880 301 aa12.78□□□□□ -0.36
TPM1-201ENST00000267996 TOMM40O96008 361 aa12.78□□□□□ -0.36
TPM1-201ENST00000267996 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
TPM1-201ENST00000267996 C9orf152Q5JTZ5 239 aa12.78□□□□□ -0.36
TPM1-201ENST00000267996 MORN5Q5VZ52 161 aa12.78□□□□□ -0.36
TPM1-201ENST00000267996 S4R3C0 116 aa12.78□□□□□ -0.36
TPM1-201ENST00000267996 GNG7O60262 68 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 PPIFP30405 207 aaKnown RBP12.77□□□□□ -0.36
TPM1-201ENST00000267996 Q6ZS46 218 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 ZNF502Q8TBZ5 544 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 SLC25A2Q9BXI2 301 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 TMEM167BQ9NRX6 74 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 ZNF355PQ9NSJ1 428 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 VPREB3Q9UKI3 123 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 TLN2Q9Y4G6 2542 aa12.77□□□□□ -0.36
TPM1-201ENST00000267996 TMEM250H0YL14 139 aa12.77□□□□□ -0.37
TPM1-201ENST00000267996 CD5LO43866 347 aa12.77□□□□□ -0.37
TPM1-201ENST00000267996 ORM2P19652 201 aa12.77□□□□□ -0.37
TPM1-201ENST00000267996 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
TPM1-201ENST00000267996 FAM90A2PQ658T7 463 aa12.77□□□□□ -0.37
TPM1-201ENST00000267996 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
TPM1-201ENST00000267996 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
TPM1-201ENST00000267996 TRAV5A0A0B4J249 113 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 H3BUA1 57 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 AP4M1O00189 453 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 SNAPINO95295 136 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 Q56UQ5 140 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 OR51G1Q8NGK1 321 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 UHRF2Q96PU4 802 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 MRPL27Q9P0M9 148 aaKnown RBP12.76□□□□□ -0.37
TPM1-201ENST00000267996 LINC00527Q9UJ94 153 aa12.76□□□□□ -0.37
TPM1-201ENST00000267996 WI2-2373I1.2A0A1W2PRP0 233 aa12.75□□□□□ -0.37
TPM1-201ENST00000267996 OR2C1O95371 312 aa12.75□□□□□ -0.37
TPM1-201ENST00000267996 CTSGP08311 255 aa12.75□□□□□ -0.37
TPM1-201ENST00000267996 ZNF491Q8N8L2 437 aa12.75□□□□□ -0.37
TPM1-201ENST00000267996 ATP6V0BQ99437 205 aa12.75□□□□□ -0.37
TPM1-201ENST00000267996 NKX6-2Q9C056 277 aaPredicted RBP12.75□□□□□ -0.37
TPM1-201ENST00000267996 FAM223BA6NKX1 122 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 FAM74A7A6NL05 159 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 C11orf94C9JXX5 98 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 OR7C2O60412 319 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 UBE2G2P60604 165 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 LYZP61626 148 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 CFHR3Q02985 330 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 FAM223AQ8IWN6 122 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 CLRN3Q8NCR9 226 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 OR5AU1Q8NGC0 362 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 HIGD1AQ9Y241 93 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 YTHDF2Q9Y5A9 579 aaKnown RBP12.74□□□□□ -0.37
TPM1-201ENST00000267996 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
TPM1-201ENST00000267996 ANK3Q12955 4377 aaKnown RBP12.74□□□□□ -0.37
TPM1-201ENST00000267996 SCGB2A1O75556 95 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 IGHV3-23P01764 117 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 ADMP35318 185 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 ATP5G3P48201 142 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 OR4F5Q8NH21 305 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 Q8WTZ3 238 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 EEF1AKMT3Q96AZ1 226 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 ZNF414Q96IQ9 312 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 NOL4LQ96MY1 436 aaPredicted RBP12.73□□□□□ -0.37
TPM1-201ENST00000267996 MS4A10Q96PG2 267 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 OR4F4Q96R69 305 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 GAR1Q9NY12 217 aaKnown RBP12.73□□□□□ -0.37
TPM1-201ENST00000267996 TRBV7-1A0A0A6YYK4 115 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 OR2T8A6NH00 312 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 HOXA3O43365 443 aaPredicted RBP12.73□□□□□ -0.37
TPM1-201ENST00000267996 PDE6DO43924 150 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 CST9LP1Q5W188 147 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 STXBP6Q8NFX7 210 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 RNF125Q96EQ8 232 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 CCDC140Q96MF4 163 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 CHRDL1Q9BU40 450 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 PAXXQ9BUH6 204 aa12.73□□□□□ -0.37
TPM1-201ENST00000267996 IGLV1-40P01703 118 aa12.72□□□□□ -0.37
TPM1-201ENST00000267996 NPPCP23582 126 aa12.72□□□□□ -0.37
TPM1-201ENST00000267996 CEBPGP53567 150 aa12.72□□□□□ -0.37
TPM1-201ENST00000267996 ATP5G2Q06055 141 aa12.72□□□□□ -0.37
TPM1-201ENST00000267996 TMEM86BQ8N661 226 aa12.72□□□□□ -0.37
TPM1-201ENST00000267996 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
TPM1-201ENST00000267996 SLC25A39Q9BZJ4 359 aaPredicted RBP12.72□□□□□ -0.37
TPM1-201ENST00000267996 OR51M1Q9H341 326 aa12.72□□□□□ -0.37
TPM1-201ENST00000267996 ACANP16112 2415 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 F6UZH7 168 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 H3BQ15 152 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 NUPL2O15504 423 aaKnown RBP12.71□□□□□ -0.37
TPM1-201ENST00000267996 TRGV3P03979 118 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 OR10J4P0C629 311 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 IL17RELQ6ZVW7 336 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 SIGLECL1Q8N7X8 197 aa12.71□□□□□ -0.37
TPM1-201ENST00000267996 SHANK2-AS3Q9BTD1 123 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms