RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 VAMP3Q15836 100 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 RNF24Q9Y225 148 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 SELENOKQ9Y6D0 94 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 MALRD1Q5VYJ5 2156 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 TCRBV4S1A1TA0A5B7 111 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 VWC2LB2RUY7 222 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 M0R296 226 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 CHEK1O14757 476 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 P01737 135 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 SUB1P53999 127 aaKnown RBP eCLIP10□□□□□ -0.81
CHMP3-201ENST00000263856 LYPD2Q6UXB3 125 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 LINC00322Q6ZN03 302 aaPredicted RBP10□□□□□ -0.81
CHMP3-201ENST00000263856 SSX8Q7RTT4 187 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 ZADH2Q8N4Q0 377 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 OSR1Q8TAX0 266 aaPredicted RBP10□□□□□ -0.81
CHMP3-201ENST00000263856 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 SPTA1P02549 2419 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 OR4C46A6NHA9 309 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 SNAI2O43623 268 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 CFHR2P36980 270 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
CHMP3-201ENST00000263856 C19orf24Q9BVV8 132 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 ASCL3Q9NQ33 180 aa10□□□□□ -0.81
CHMP3-201ENST00000263856 WNK2Q9Y3S1 2297 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 LINC00614P0C842 121 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 CNTFRP26992 372 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 CA7P43166 264 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 GAGE1Q13065 139 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 POU2AF1Q16633 256 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 OR4C13Q8NGP0 309 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 FXYD5Q96DB9 178 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 WASHC3Q9Y3C0 194 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 CACNA1BQ00975 2339 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 A0A1W2PPI3 338 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 CBY3A6NI87 242 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 CCL25O15444 150 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 NBEAP1P0C6P0 100 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 CD40P25942 277 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 TMEM200BQ69YZ2 307 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 Q71RC1 249 aaPredicted RBP9.99□□□□□ -0.81
CHMP3-201ENST00000263856 PRNTQ86SH4 94 aa9.99□□□□□ -0.81
CHMP3-201ENST00000263856 TRAV9-2A0A087WT02 112 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 CIARTQ8N365 385 aaPredicted RBP9.98□□□□□ -0.81
CHMP3-201ENST00000263856 LINC00312Q9Y6C7 94 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 S4R3C0 116 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 ZZEF1O43149 2961 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 FNDC10F2Z333 226 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 COL8A1P27658 744 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 HBBP68871 147 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 CACNG8Q8WXS5 425 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 C22orf15Q8WYQ4 148 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 PERPQ96FX8 193 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 TMEM70Q9BUB7 260 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 FAM215AQ9Y5M1 114 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 OTOGLQ3ZCN5 2332 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 ITGB1BP1O14713 200 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 RBP4P02753 201 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 FTH1P19P0C7X4 201 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 PLGLAQ15195 96 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
CHMP3-201ENST00000263856 IGKV1D-37A0A075B6S9 117 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 LOC102724200A0A096LPH7 203 aaPredicted RBP9.97□□□□□ -0.81
CHMP3-201ENST00000263856 VMA21Q3ZAQ7 101 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 PLA2G2CQ5R387 149 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 OR4C5Q8NGB2 326 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 ZNF596Q8TC21 504 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 IGFBPL1Q8WX77 278 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 RPP21Q9H633 154 aaKnown RBP9.97□□□□□ -0.81
CHMP3-201ENST00000263856 IGLV3-9A0A075B6K5 115 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 MUC21A0A0G2JKD1 596 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 MUC21A0A140T8X8 626 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 PSMB11A5LHX3 300 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 CGB1A6NKQ9 187 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 C22orf46C9J442 243 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 NDUFB3O43676 98 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 TNFRSF1AP19438 455 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 MPV17L2Q567V2 206 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 MUC21Q5SSG8 566 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 GOLT1AQ6ZVE7 132 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 ZNF738Q8NE65 137 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 OR8B3Q8NGG8 313 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 Q9H3A6 140 aa9.97□□□□□ -0.81
CHMP3-201ENST00000263856 SFTPCP11686 197 aa9.96□□□□□ -0.81
CHMP3-201ENST00000263856 COX7A1P24310 79 aa9.96□□□□□ -0.81
CHMP3-201ENST00000263856 ZNF833PQ6ZTB9 187 aa9.96□□□□□ -0.81
CHMP3-201ENST00000263856 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.81
CHMP3-201ENST00000263856 MRPL27Q9P0M9 148 aaKnown RBP9.96□□□□□ -0.81
CHMP3-201ENST00000263856 ARHGAP32A7KAX9 2087 aa9.96□□□□□ -0.81
CHMP3-201ENST00000263856 PPIAL4EA0A075B759 164 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 TMSB15BA0A087X1C1 80 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 MBD3L4A6NDZ8 208 aaPredicted RBP9.96□□□□□ -0.82
CHMP3-201ENST00000263856 MBD3L3A6NE82 208 aaPredicted RBP9.96□□□□□ -0.82
CHMP3-201ENST00000263856 MBD3L5A6NJ08 208 aaPredicted RBP9.96□□□□□ -0.82
CHMP3-201ENST00000263856 PPIAL4DF5H284 164 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 PPIAL4FP0DN26 164 aa9.96□□□□□ -0.82
CHMP3-201ENST00000263856 MRPL52Q86TS9 123 aaKnown RBP9.96□□□□□ -0.82
CHMP3-201ENST00000263856 MBD3L2Q8NHZ7 208 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms