RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 GAFA1Q96PS6 74 aa13.18□□□□□ -0.3
PDZRN3-201ENST00000263666 WNT2P09544 360 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 CSN1S1P47710 185 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 EXOC3-AS1Q8N2X6 119 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 RAB1CQ92928 201 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 AREGP15514 252 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 MBNL2Q5VZF2 373 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 FOXA2Q9Y261 457 aaPredicted RBP13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 IGHV3-49A0A0A0MS15 119 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 RPL15P61313 204 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 DIRC2Q96SL1 478 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 PYGO2Q9BRQ0 406 aa13.17□□□□□ -0.3
PDZRN3-201ENST00000263666 NPSP0C0P6 89 aa13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 PNKDQ8N490 385 aa13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 C17orf100A8MU93 164 aa13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 K7EM74 188 aa13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 RNASE2P10153 161 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 FCER1GP30273 86 aa13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 PRR30Q53SZ7 412 aaPredicted RBP13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 TMEM200BQ69YZ2 307 aa13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 OSR1Q8TAX0 266 aaPredicted RBP13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 RNASEH2CQ8TDP1 164 aaKnown RBP13.16□□□□□ -0.3
PDZRN3-201ENST00000263666 GPX1P07203 203 aa13.15□□□□□ -0.3
PDZRN3-201ENST00000263666 CNTFRP26992 372 aa13.15□□□□□ -0.3
PDZRN3-201ENST00000263666 PRRX1P54821 245 aa13.15□□□□□ -0.3
PDZRN3-201ENST00000263666 SLAQ13239 276 aa13.15□□□□□ -0.3
PDZRN3-201ENST00000263666 PTPN13Q12923 2485 aa13.15□□□□□ -0.3
PDZRN3-201ENST00000263666 CIARTQ8N365 385 aaPredicted RBP13.15□□□□□ -0.3
PDZRN3-201ENST00000263666 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.3
PDZRN3-201ENST00000263666 TNRC6AQ8NDV7 1962 aaKnown RBP13.15□□□□□ -0.3
PDZRN3-201ENST00000263666 TDGF1P3P51864 188 aa13.15□□□□□ -0.31
PDZRN3-201ENST00000263666 OSTCQ9NRP0 149 aa13.15□□□□□ -0.31
PDZRN3-201ENST00000263666 V9GYV3 84 aa13.15□□□□□ -0.31
PDZRN3-201ENST00000263666 LOC400499M0QZD8 3231 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 TYMSP04818 313 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 SELENOTP62341 195 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 ZNF841Q6ZN19 808 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 CENPVQ7Z7K6 275 aaPredicted RBP13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 C1orf174Q8IYL3 243 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 AAMDCQ9H7C9 122 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 TMEM14BQ9NUH8 114 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 IGHV3-66A0A0C4DH42 116 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 F2RL2O00254 374 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 IGHG3P01860 377 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 IL4P05112 153 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 NUP35Q8NFH5 326 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 LINC00312Q9Y6C7 94 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 MUC3AQ02505 3323 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 A0A1W2PS18 150 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 ORM1P02763 201 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 CX3CL1P78423 397 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 SPRY4Q9C004 299 aa13.14□□□□□ -0.31
PDZRN3-201ENST00000263666 OR4C46A6NHA9 309 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 K7ENP7 123 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 GNB1LQ9BYB4 327 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 Q9H3A6 140 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 TMEM191AQ9H0A3 160 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 A0A1W2PRE2 83 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 C5orf17Q8NAS9 161 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 BEND2Q8NDZ0 799 aa13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-201ENST00000263666 E7EUB6 86 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 COX19Q49B96 90 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 MAP1LC3CQ9BXW4 147 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 ARL3P36405 182 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 HBBP68871 147 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 WT1-ASQ06250 92 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 AARDQ4LEZ3 155 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 CLEC7AQ9BXN2 247 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 hDV102S1A0JD36 115 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 NUDT3O95989 172 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 EPDR1Q9UM22 224 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 TMEM116Q8NCL8 245 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 TSKUQ8WUA8 353 aa13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-201ENST00000263666 DSCAMO60469 2012 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 TRBV9A0A0B4J1U6 114 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 PPIAL4CA0A0B4J2A2 164 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 IGHV1-69-2A0A0G2JMI3 117 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 C9JCJ5 164 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 H0YJW9 148 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 OR2J3O76001 311 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 PPIAL4GP0DN37 164 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 BTF3P20290 206 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 PPOXP50336 477 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 ECSCRQ19T08 205 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 IGFL4Q6B9Z1 124 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 ZNF788Q6ZQV5 615 aa13.11□□□□□ -0.31
PDZRN3-201ENST00000263666 SETD2Q9BYW2 2564 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms