RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 FBLN5Q9UBX5 448 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 IGKCP01834 107 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 NR2C2APQ86WQ0 139 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 LINC01560Q8TB33 94 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BKO60814 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BJP06899 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BOP23527 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BBP33778 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BDP58876 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BCP62807 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST2H2BEQ16778 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BHQ93079 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BNQ99877 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H2BMQ99879 126 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 CHTOPQ9Y3Y2 248 aaKnown RBP14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 A0A1W2PRE2 83 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 EPDR1Q9UM22 224 aa14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 COLQQ9Y215 455 aaPredicted RBP14.6□□□□□ -0.07
NOTCH3-201ENST00000263388 RNF125Q96EQ8 232 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 UMODP07911 640 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 HIST1H4AP62805 103 aaKnown RBP14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 OR9G4Q8NGQ1 327 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 IGHV3OR16-10A0A075B7F0 116 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 CCL1P22362 96 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 MPZP25189 248 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 TDGF1P3P51864 188 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 EDA2RQ9HAV5 297 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 TRAV8-1A0A0A6YYK1 113 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 TMEM155Q4W5P6 130 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 S4R3C0 116 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 ATP1A1-AS1Q5TC04 95 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 STHQ8IWL8 128 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 SMPXQ9UHP9 88 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 LTBP1Q14766 1721 aa14.59□□□□□ -0.07
NOTCH3-201ENST00000263388 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.58□□□□□ -0.07
NOTCH3-201ENST00000263388 UPK2O00526 184 aa14.58□□□□□ -0.07
NOTCH3-201ENST00000263388 LHX2P50458 406 aa14.58□□□□□ -0.07
NOTCH3-201ENST00000263388 IGKV1D-43A0A0B4J1Z2 117 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 HOXD3P31249 432 aaPredicted RBP14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 ERG28Q9UKR5 140 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 PTPRQQ9UMZ3 2332 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 MUC21A0A0G2JKD1 596 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 MUC21A0A140T8X8 626 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 MUC21Q5SSG8 566 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 TRAV2A0A0B4J234 112 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 RASL11AQ6T310 242 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 EFNB3Q15768 340 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 HEPN1Q6WQI6 88 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 COX11Q9Y6N1 276 aa14.58□□□□□ -0.08
NOTCH3-201ENST00000263388 CELA3BP08861 270 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 IGLV3-19P01714 112 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 BTCP35070 178 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 LAGE3Q14657 143 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 TMEM133Q9H2Q1 129 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 A0A1W2PR77 199 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 FAM216BQ8N7L0 139 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 A0A0G2JMM0 328 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 A0A1W2PPB8 328 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 A0A1W2PRS3 328 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 KIR3DP1A8MWS1 328 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 ZNF479Q96JC4 524 aa14.57□□□□□ -0.08
NOTCH3-201ENST00000263388 J3QRE1 110 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 TOMM40O96008 361 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 C8orf46Q8TAG6 207 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 IGKV3D-20A0A0C4DH25 116 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 CD55P08174 381 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 FAM27E3Q08E93 113 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 JPT2Q9H910 190 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 CELA3AP09093 270 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 DNAJC30Q96LL9 226 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 IMMP1LQ96LU5 166 aa14.56□□□□□ -0.08
NOTCH3-201ENST00000263388 CD28P10747 220 aa14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 VDAC2P45880 294 aaPredicted RBP14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 C1QL4Q86Z23 238 aa14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 TNFRSF6BO95407 300 aa14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 DLX4Q92988 240 aaPredicted RBP14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 SSBP2P81877 361 aaPredicted RBP14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 SSC4DQ8WTU2 575 aa14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 WBP1Q96G27 269 aa14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 DUSP14O95147 198 aaKnown RBP14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 ATRAIDQ6UW56 229 aa14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 TSKUQ8WUA8 353 aa14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 PRCDQ00LT1 54 aa14.55□□□□□ -0.08
NOTCH3-201ENST00000263388 CEACAM1P13688 526 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 GNG5P63218 68 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 TNFRSF14Q92956 283 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 SLC25A28Q96A46 364 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 C7orf69Q9H7B7 122 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 SFTA2Q6UW10 78 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 ESDP10768 282 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 ZNF362Q5T0B9 420 aaPredicted RBP14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 IGLV3-32A0A0A0MS00 114 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 LURAP1LQ8IV03 231 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 RNASE6Q93091 150 aaKnown RBP14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 GATA2P23769 480 aaPredicted RBP14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 TIMP3P35625 211 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 GTSCR1Q86UQ5 136 aa14.54□□□□□ -0.08
NOTCH3-201ENST00000263388 ITGB1BP1O14713 200 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 LAMTOR3Q9UHA4 124 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms