RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 COX7A2P2O60397 106 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 APCSP02743 223 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 ORM2P19652 201 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 TNFSF4P23510 183 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 TAS2R45P59539 299 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 GDF5OSQ5U4N7 250 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 WDR73Q6P4I2 378 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 SLC25A48Q6ZT89 311 aaKnown RBP8.12□□□□□ -1.11
LIG3-201ENST00000262327 IGF2BP2-AS1Q96M15 143 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 TP73-AS1Q9UF72 201 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 K7ERU9 68 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 FCN3O75636 299 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 AMY1AP04745 511 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 PPOXP50336 477 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 RPL8P62917 257 aaKnown RBP8.12□□□□□ -1.11
LIG3-201ENST00000262327 WT1-ASQ06250 92 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 PATE2Q6UY27 113 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 ZNF596Q8TC21 504 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 KCNS1Q96KK3 526 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 ZNF331Q9NQX6 463 aaPredicted RBP8.12□□□□□ -1.11
LIG3-201ENST00000262327 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 UQCR10Q9UDW1 63 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 AMMECR1Q9Y4X0 333 aaPredicted RBP8.12□□□□□ -1.11
LIG3-201ENST00000262327 LRBAP50851 2863 aa8.12□□□□□ -1.11
LIG3-201ENST00000262327 ABCA4P78363 2273 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 ESDP10768 282 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 RBPJQ06330 500 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 PMCHL1Q16048 86 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 TIMM23BQ5SRD1 257 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 GFRALQ6UXV0 394 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 ZNF788Q6ZQV5 615 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 NIT1Q86X76 327 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 ADTRPQ96IZ2 230 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 SH2D7A6NKC9 451 aaPredicted RBP8.11□□□□□ -1.11
LIG3-201ENST00000262327 ENSAO43768 121 aaKnown RBP8.11□□□□□ -1.11
LIG3-201ENST00000262327 HYPMO75409 117 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 ZNF324O75467 553 aaPredicted RBP8.11□□□□□ -1.11
LIG3-201ENST00000262327 SELENOVP59797 346 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 TNXAQ16473 311 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 C2orf83Q53S99 150 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.11□□□□□ -1.11
LIG3-201ENST00000262327 CCL17Q92583 94 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 ASCL2Q99929 193 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 PAXXQ9BUH6 204 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 BET1LQ9NYM9 111 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 LY96Q9Y6Y9 160 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 MED13LQ71F56 2210 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 TRAV9-1A0A075B6T8 112 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 SLC25A17O43808 307 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 LYPD2Q6UXB3 125 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 OR10X1Q8NGY0 326 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 SAP30LQ9HAJ7 183 aa8.11□□□□□ -1.11
LIG3-201ENST00000262327 IGLV3-9A0A075B6K5 115 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 IGLC2P0DOY2 106 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 IGLC3P0DOY3 106 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 ERHP84090 104 aaKnown RBP8.1□□□□□ -1.11
LIG3-201ENST00000262327 Q56UQ5 140 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 C10orf113Q5VZT2 155 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 RNASEKQ6P5S7 137 aaKnown RBP8.1□□□□□ -1.11
LIG3-201ENST00000262327 ZNF841Q6ZN19 808 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 Q71RC1 249 aaPredicted RBP8.1□□□□□ -1.11
LIG3-201ENST00000262327 TCF24Q7RTU0 167 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 C1orf174Q8IYL3 243 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 KIR3DL3Q8N743 410 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 OR4B1Q8NGF8 309 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 FLYWCH2Q96CP2 140 aaKnown RBP8.1□□□□□ -1.11
LIG3-201ENST00000262327 CHODLQ9H9P2 273 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 NDUFA4L2Q9NRX3 87 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 ZNF257Q9Y2Q1 563 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 TIMM8BQ9Y5J9 83 aaPredicted RBP8.1□□□□□ -1.11
LIG3-201ENST00000262327 SPTA1P02549 2419 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 SMIM27A0A1W2PRY6 76 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 hADV38S2A0JD32 116 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 CGB1A6NKQ9 187 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 H0YJW9 148 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 APOA2P02652 100 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 CTRLP40313 264 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 FOXA3P55318 350 aaPredicted RBP8.1□□□□□ -1.11
LIG3-201ENST00000262327 POU2AF1Q16633 256 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 OR1B1Q8NGR6 318 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 C18orf32Q8TCD1 76 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 FAM222BQ8WU58 562 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 CLEC7AQ9BXN2 247 aa8.1□□□□□ -1.11
LIG3-201ENST00000262327 MALRD1Q5VYJ5 2156 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 DPRXA6NFQ7 191 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 VWC2LB2RUY7 222 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 SAP30O75446 220 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 CD40P25942 277 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 TMEM200BQ69YZ2 307 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 LINC00305Q7Z4B0 112 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 OR1L8Q8NGR8 309 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 TRBV9A0A0B4J1U6 114 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 PSMB11A5LHX3 300 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 IZUMO1RA6ND01 250 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 HIGD1CA8MV81 97 aa8.09□□□□□ -1.11
LIG3-201ENST00000262327 PEX7O00628 323 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms