RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 OR4X1Q8NH49 305 aa21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 COMMD5Q9GZQ3 224 aa21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 AURKAIP1Q9NWT8 199 aaPredicted RBP21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 ACTL6BO94805 426 aa21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 FXYD3Q14802 87 aa21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 RBKSQ9H477 322 aa21.72■■□□□ 1.07
SMARCD3-201ENST00000262188 COMPP49747 757 aaPredicted RBP21.71■■□□□ 1.07
SMARCD3-201ENST00000262188 RPS20P60866 119 aaKnown RBP21.71■■□□□ 1.07
SMARCD3-201ENST00000262188 HIPK2Q9H2X6 1198 aa21.71■■□□□ 1.07
SMARCD3-201ENST00000262188 FKBP11Q9NYL4 201 aa21.71■■□□□ 1.07
SMARCD3-201ENST00000262188 HLA-DRB1P01911 266 aa21.7■■□□□ 1.07
SMARCD3-201ENST00000262188 IAPPP10997 89 aa21.7■■□□□ 1.07
SMARCD3-201ENST00000262188 ID3Q02535 119 aa21.7■■□□□ 1.07
SMARCD3-201ENST00000262188 HSPB7Q9UBY9 170 aa21.7■■□□□ 1.07
SMARCD3-201ENST00000262188 LINC00527Q9UJ94 153 aa21.7■■□□□ 1.07
SMARCD3-201ENST00000262188 RCL1Q9Y2P8 373 aaKnown RBP21.7■■□□□ 1.07
SMARCD3-201ENST00000262188 URGCP-MRPS24S4R325 110 aa21.7■■□□□ 1.07
SMARCD3-201ENST00000262188 SSSCA1O60232 199 aa21.7■■□□□ 1.06
SMARCD3-201ENST00000262188 BMI1P35226 326 aa21.7■■□□□ 1.06
SMARCD3-201ENST00000262188 HILS1P60008 231 aa21.7■■□□□ 1.06
SMARCD3-201ENST00000262188 HSPE1P61604 102 aaKnown RBP21.7■■□□□ 1.06
SMARCD3-201ENST00000262188 TMEM95Q3KNT9 176 aa21.7■■□□□ 1.06
SMARCD3-201ENST00000262188 SRSF12Q8WXF0 261 aaKnown RBP21.7■■□□□ 1.06
SMARCD3-201ENST00000262188 FAM181BA6NEQ2 426 aa21.69■■□□□ 1.06
SMARCD3-201ENST00000262188 RPL27AP46776 148 aaKnown RBP21.69■■□□□ 1.06
SMARCD3-201ENST00000262188 C16orf54Q6UWD8 224 aa21.69■■□□□ 1.06
SMARCD3-201ENST00000262188 C19orf35Q6ZS72 473 aa21.69■■□□□ 1.06
SMARCD3-201ENST00000262188 TMEM86BQ8N661 226 aa21.69■■□□□ 1.06
SMARCD3-201ENST00000262188 PYGO2Q9BRQ0 406 aa21.69■■□□□ 1.06
SMARCD3-201ENST00000262188 NAGKQ9UJ70 344 aa21.69■■□□□ 1.06
SMARCD3-201ENST00000262188 PRH1P02810 166 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 C16orf82Q7Z2V1 217 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 NDUFA4L2Q9NRX3 87 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 XKRY2A2RUG3 117 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 CEBPZOSA8MTT3 80 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 REG1AP05451 166 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 PTTG1IPP53801 180 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 ZNF506Q5JVG8 444 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 ZNF562Q6V9R5 426 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 OR1L8Q8NGR8 309 aa21.68■■□□□ 1.06
SMARCD3-201ENST00000262188 ATP6V0E1O15342 81 aa21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 DEDDO75618 318 aa21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 EGR2P11161 476 aaPredicted RBP21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 ARPC1AQ92747 370 aa21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 TEX22C9J3V5 150 aa21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 SCAF4O95104 1147 aaKnown RBP21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 TMEM50AO95807 157 aa21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 ACOT6Q3I5F7 207 aaPredicted RBP21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 OR5B3Q8NH48 314 aa21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 IMMP2LQ96T52 175 aa21.67■■□□□ 1.06
SMARCD3-201ENST00000262188 H3BP45 60 aa21.66■■□□□ 1.06
SMARCD3-201ENST00000262188 SYNGR2O43760 224 aa21.66■■□□□ 1.06
SMARCD3-201ENST00000262188 TOMM40O96008 361 aa21.66■■□□□ 1.06
SMARCD3-201ENST00000262188 AREGP15514 252 aa21.66■■□□□ 1.06
SMARCD3-201ENST00000262188 PRCDQ00LT1 54 aa21.66■■□□□ 1.06
SMARCD3-201ENST00000262188 GBGT1Q8N5D6 347 aa21.66■■□□□ 1.06
SMARCD3-201ENST00000262188 SLC35E1Q96K37 410 aa21.66■■□□□ 1.06
SMARCD3-201ENST00000262188 ZNF257Q9Y2Q1 563 aa21.66■■□□□ 1.06
SMARCD3-201ENST00000262188 WT1-ASQ06250 92 aa21.65■■□□□ 1.06
SMARCD3-201ENST00000262188 UBE2V1Q13404 147 aa21.65■■□□□ 1.06
SMARCD3-201ENST00000262188 OR52E5Q8NH55 327 aa21.65■■□□□ 1.06
SMARCD3-201ENST00000262188 TMEM170AQ8WVE7 144 aa21.65■■□□□ 1.06
SMARCD3-201ENST00000262188 WSB1Q9Y6I7 421 aa21.65■■□□□ 1.06
SMARCD3-201ENST00000262188 ASPHD1Q5U4P2 390 aa21.64■■□□□ 1.05
SMARCD3-201ENST00000262188 ZNF702PQ9H963 129 aa21.64■■□□□ 1.05
SMARCD3-201ENST00000262188 TMEM238C9JI98 176 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 G3V318 75 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 PAX9P55771 341 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 PLEKHA3Q9HB20 300 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 IGLC7A0M8Q6 106 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 FAM90A26D6RGX4 464 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 E5RGE8 158 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 SCGB1D1O95968 90 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 RNASE1P07998 156 aaKnown RBP21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 VDAC2P45880 294 aaPredicted RBP21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 ECSCRQ19T08 205 aa21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 ALKBH7Q9BT30 221 aaPredicted RBP21.63■■□□□ 1.05
SMARCD3-201ENST00000262188 PDLIM3Q53GG5 364 aaPredicted RBP21.62■■□□□ 1.05
SMARCD3-201ENST00000262188 LINC01551Q86U37 167 aa21.62■■□□□ 1.05
SMARCD3-201ENST00000262188 NPFFR1Q9GZQ6 430 aa21.62■■□□□ 1.05
SMARCD3-201ENST00000262188 CSTL1Q9H114 145 aa21.62■■□□□ 1.05
SMARCD3-201ENST00000262188 HEYLQ9NQ87 328 aaPredicted RBP21.62■■□□□ 1.05
SMARCD3-201ENST00000262188 IGHG2P01859 326 aa21.61■■□□□ 1.05
SMARCD3-201ENST00000262188 PMS2P11Q13670 270 aa21.61■■□□□ 1.05
SMARCD3-201ENST00000262188 C11orf1Q9H5F2 150 aa21.61■■□□□ 1.05
SMARCD3-201ENST00000262188 A6NJY4 79 aa21.61■■□□□ 1.05
SMARCD3-201ENST00000262188 FAM3BP58499 235 aaPredicted RBP21.61■■□□□ 1.05
SMARCD3-201ENST00000262188 RARRES2Q99969 163 aa21.61■■□□□ 1.05
SMARCD3-201ENST00000262188 LYRM2Q9NU23 88 aaPredicted RBP21.61■■□□□ 1.05
SMARCD3-201ENST00000262188 JMJD1CQ15652 2540 aa21.6■■□□□ 1.05
SMARCD3-201ENST00000262188 CCL25O15444 150 aa21.59■■□□□ 1.05
SMARCD3-201ENST00000262188 HBE1P02100 147 aa21.59■■□□□ 1.05
SMARCD3-201ENST00000262188 VAMP2P63027 116 aa21.59■■□□□ 1.05
SMARCD3-201ENST00000262188 TMEM183BQ1AE95 376 aa21.59■■□□□ 1.05
SMARCD3-201ENST00000262188 TEX43Q6ZNM6 134 aa21.59■■□□□ 1.05
SMARCD3-201ENST00000262188 ENY2Q9NPA8 101 aa21.59■■□□□ 1.05
SMARCD3-201ENST00000262188 Q6ZSV7 163 aa21.59■■□□□ 1.05
SMARCD3-201ENST00000262188 PRSS22Q9GZN4 317 aa21.59■■□□□ 1.05
SMARCD3-201ENST00000262188 ICAM4Q14773 271 aa21.58■■□□□ 1.05
SMARCD3-201ENST00000262188 SPANXN5Q5MJ07 72 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms