RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TRAV34A0A0B4J273 112 aa17.19■□□□□ 0.34
CLN6-201ENST00000249806 NDUFA3O95167 84 aa17.19■□□□□ 0.34
CLN6-201ENST00000249806 FRMD6-AS1P0C7T7 363 aa17.19■□□□□ 0.34
CLN6-201ENST00000249806 S100A12P80511 92 aa17.19■□□□□ 0.34
CLN6-201ENST00000249806 KLF17Q5JT82 389 aaPredicted RBP17.18■□□□□ 0.34
CLN6-201ENST00000249806 COA6Q5JTJ3 125 aaKnown RBP17.18■□□□□ 0.34
CLN6-201ENST00000249806 C1orf122Q6ZSJ8 110 aa17.18■□□□□ 0.34
CLN6-201ENST00000249806 PACRGQ96M98 296 aaPredicted RBP17.18■□□□□ 0.34
CLN6-201ENST00000249806 GNG5P63218 68 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 RPEL1Q2QD12 228 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 CDC42EP3Q9UKI2 254 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 CACNA1AO00555 2505 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 H3BTX0 84 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 K7EIM0 57 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 HOXB4P17483 251 aaPredicted RBP17.17■□□□□ 0.34
CLN6-201ENST00000249806 MYCNOSP40205 109 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 CNN1P51911 297 aaKnown RBP17.17■□□□□ 0.34
CLN6-201ENST00000249806 LYZP61626 148 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 C5orf64Q2M2E5 130 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 SRSF8Q9BRL6 282 aaKnown RBP17.17■□□□□ 0.34
CLN6-201ENST00000249806 CFAP46Q8IYW2 2715 aa17.17■□□□□ 0.34
CLN6-201ENST00000249806 PEX7O00628 323 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 NBEAP1P0C6P0 100 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 CBLN1P23435 193 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 EFNA4P52798 201 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 PLP1P60201 277 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 OR8I2Q8N0Y5 310 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 STXBP6Q8NFX7 210 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 AMBPP02760 352 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 PDLIM4P50479 330 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 OSTCQ9NRP0 149 aa17.16■□□□□ 0.34
CLN6-201ENST00000249806 PGPA6NDG6 321 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 NCBP2LA6PVI3 153 aaKnown RBP17.15■□□□□ 0.34
CLN6-201ENST00000249806 ISLRO14498 428 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 IGKV1-17P01599 117 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 TAS2R60P59551 318 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 YPEL3P61236 119 aaPredicted RBP17.15■□□□□ 0.34
CLN6-201ENST00000249806 IBA57Q5T440 356 aaKnown RBP17.15■□□□□ 0.34
CLN6-201ENST00000249806 RASL11BQ9BPW5 248 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 S4R3C0 116 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 SPINK4O60575 86 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 GP9P14770 177 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 ADMP35318 185 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 SGK494Q96LW2 274 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 SIRPDQ9H106 197 aa17.15■□□□□ 0.34
CLN6-201ENST00000249806 A0A1B0GUS0 222 aa17.14■□□□□ 0.33
CLN6-201ENST00000249806 KIR3DL3Q8N743 410 aa17.14■□□□□ 0.33
CLN6-201ENST00000249806 HIGD1AQ9Y241 93 aa17.14■□□□□ 0.33
CLN6-201ENST00000249806 TCL1AP56279 114 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 CX3CL1P78423 397 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 BPESC1Q9GZL8 116 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 SERTAD4Q9NUC0 356 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 TRAV9-1A0A075B6T8 112 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 LINC00587B1AMM8 73 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 SLC25A5P05141 298 aaKnown RBP17.13■□□□□ 0.33
CLN6-201ENST00000249806 SLC35B1P78383 322 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 CCDC144NLQ6NUI1 221 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 BAGE2Q86Y30 109 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 OR1L6Q8NGR2 347 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 RBM14Q96PK6 669 aaKnown RBP17.13■□□□□ 0.33
CLN6-201ENST00000249806 EPDR1Q9UM22 224 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 RPH3ALQ9UNE2 315 aa17.13■□□□□ 0.33
CLN6-201ENST00000249806 CA1P00915 261 aaPredicted RBP17.12■□□□□ 0.33
CLN6-201ENST00000249806 RD3LP0DJH9 198 aa17.12■□□□□ 0.33
CLN6-201ENST00000249806 HIST1H1BP16401 226 aaKnown RBP17.12■□□□□ 0.33
CLN6-201ENST00000249806 IER3P46695 156 aa17.12■□□□□ 0.33
CLN6-201ENST00000249806 NDPQ00604 133 aa17.12■□□□□ 0.33
CLN6-201ENST00000249806 FAM168AQ92567 244 aa17.12■□□□□ 0.33
CLN6-201ENST00000249806 SLC25A39Q9BZJ4 359 aaPredicted RBP17.12■□□□□ 0.33
CLN6-201ENST00000249806 ZNF562Q6V9R5 426 aa17.12■□□□□ 0.33
CLN6-201ENST00000249806 ZNF600Q6ZNG1 722 aa17.12■□□□□ 0.33
CLN6-201ENST00000249806 TOX4O94842 621 aa17.11■□□□□ 0.33
CLN6-201ENST00000249806 IGHV2-70DA0A0C4DH43 119 aa17.11■□□□□ 0.33
CLN6-201ENST00000249806 LMO4P61968 165 aa17.11■□□□□ 0.33
CLN6-201ENST00000249806 MINOS1Q5TGZ0 78 aa17.11■□□□□ 0.33
CLN6-201ENST00000249806 Q8N6K4 173 aa17.11■□□□□ 0.33
CLN6-201ENST00000249806 MRPL18Q9H0U6 180 aaKnown RBP17.11■□□□□ 0.33
CLN6-201ENST00000249806 MINOS1-NBL1R4GNA1 71 aa17.11■□□□□ 0.33
CLN6-201ENST00000249806 GRIFINA4D1Z8 144 aa17.1■□□□□ 0.33
CLN6-201ENST00000249806 ZNF705GA8MUZ8 300 aaPredicted RBP17.1■□□□□ 0.33
CLN6-201ENST00000249806 TMEM256Q8N2U0 113 aa17.1■□□□□ 0.33
CLN6-201ENST00000249806 ARPC1AQ92747 370 aa17.1■□□□□ 0.33
CLN6-201ENST00000249806 FANCD2OSQ96PS1 177 aa17.1■□□□□ 0.33
CLN6-201ENST00000249806 MRPL27Q9P0M9 148 aaKnown RBP17.1■□□□□ 0.33
CLN6-201ENST00000249806 TBX15Q96SF7 602 aa17.09■□□□□ 0.33
CLN6-201ENST00000249806 CACNA1BQ00975 2339 aa17.09■□□□□ 0.33
CLN6-201ENST00000249806 SNURFLB1AK76 121 aa17.09■□□□□ 0.33
CLN6-201ENST00000249806 NUPR1O60356 82 aa17.09■□□□□ 0.33
CLN6-201ENST00000249806 TMEM183BQ1AE95 376 aa17.09■□□□□ 0.33
CLN6-201ENST00000249806 Q9H3A6 140 aa17.09■□□□□ 0.33
CLN6-201ENST00000249806 CELSR1Q9NYQ6 3014 aa17.09■□□□□ 0.33
CLN6-201ENST00000249806 OOSP1A8MZH6 123 aa17.08■□□□□ 0.33
CLN6-201ENST00000249806 TMEM11P17152 192 aa17.08■□□□□ 0.33
CLN6-201ENST00000249806 UBE2G1P62253 170 aa17.08■□□□□ 0.33
CLN6-201ENST00000249806 EBI3Q14213 229 aa17.08■□□□□ 0.33
CLN6-201ENST00000249806 FAM120AOSQ5T036 256 aa17.08■□□□□ 0.33
CLN6-201ENST00000249806 PRR27Q6MZM9 219 aa17.08■□□□□ 0.33
CLN6-201ENST00000249806 ZNF586Q9NXT0 402 aa17.08■□□□□ 0.33
CLN6-201ENST00000249806 IGSF10Q6WRI0 2623 aa17.08■□□□□ 0.32
CLN6-201ENST00000249806 LPAR2Q9HBW0 351 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms