RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 Q8WTZ3 238 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 GATAD1Q8WUU5 269 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 SH3BGRL3Q9H299 93 aa10.03□□□□□ -0.8
LSM8-201ENST00000249299 NF1P21359 2839 aa10.02□□□□□ -0.8
LSM8-201ENST00000249299 NIPBLQ6KC79 2804 aaeCLIP10.02□□□□□ -0.81
LSM8-201ENST00000249299 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 IGHV3-48P01763 117 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 RAB14P61106 215 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 BLOC1S1P78537 153 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 TMEM41BQ5BJD5 291 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 FFAR4Q5NUL3 377 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 OR51G1Q8NGK1 321 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 PFDN5Q99471 154 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 RNF114Q9Y508 228 aa10.02□□□□□ -0.81
LSM8-201ENST00000249299 OR2T8A6NH00 312 aa10.01□□□□□ -0.81
LSM8-201ENST00000249299 SEC14L6B5MCN3 397 aa10.01□□□□□ -0.81
LSM8-201ENST00000249299 LGALS1P09382 135 aaKnown RBP10.01□□□□□ -0.81
LSM8-201ENST00000249299 GPR183P32249 361 aa10.01□□□□□ -0.81
LSM8-201ENST00000249299 ZNF90Q03938 601 aa10.01□□□□□ -0.81
LSM8-201ENST00000249299 MIC13Q5XKP0 118 aa10.01□□□□□ -0.81
LSM8-201ENST00000249299 CLEC19AQ6UXS0 136 aa10.01□□□□□ -0.81
LSM8-201ENST00000249299 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
LSM8-201ENST00000249299 GGCTO75223 188 aaKnown RBP10□□□□□ -0.81
LSM8-201ENST00000249299 YIF1AO95070 293 aa10□□□□□ -0.81
LSM8-201ENST00000249299 RPLP1P05386 114 aaKnown RBP10□□□□□ -0.81
LSM8-201ENST00000249299 PSG1P11464 419 aa10□□□□□ -0.81
LSM8-201ENST00000249299 ADMP35318 185 aa10□□□□□ -0.81
LSM8-201ENST00000249299 TIGITQ495A1 244 aa10□□□□□ -0.81
LSM8-201ENST00000249299 CLLU1Q5K131 121 aa10□□□□□ -0.81
LSM8-201ENST00000249299 TMEM182Q6ZP80 229 aaPredicted RBP10□□□□□ -0.81
LSM8-201ENST00000249299 C4orf3Q8WVX3 66 aa10□□□□□ -0.81
LSM8-201ENST00000249299 ACTR3CQ9C0K3 210 aaPredicted RBP10□□□□□ -0.81
LSM8-201ENST00000249299 DNAJC4Q9NNZ3 241 aa10□□□□□ -0.81
LSM8-201ENST00000249299 RPRMQ9NS64 109 aa10□□□□□ -0.81
LSM8-201ENST00000249299 PFDN2Q9UHV9 154 aa10□□□□□ -0.81
LSM8-201ENST00000249299 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 WI2-2373I1.2A0A1W2PRP0 233 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 TEX46H3BTG2 121 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 BMPR1BO00238 502 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 NDUFA4O00483 81 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 HYPMO75409 117 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 OR5G3P0C626 314 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 ARL3P36405 182 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 RHOBP62745 196 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 GPHB5Q86YW7 130 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 RPP25LQ8N5L8 163 aaKnown RBP9.99□□□□□ -0.81
LSM8-201ENST00000249299 OR10G4Q8NGN3 311 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 OR10G9Q8NGN4 311 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 OR10G7Q8NGN6 311 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 MBD3L1Q8WWY6 194 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 CHRDL1Q9BU40 450 aa9.99□□□□□ -0.81
LSM8-201ENST00000249299 MRPL32Q9BYC8 188 aaKnown RBP9.99□□□□□ -0.81
LSM8-201ENST00000249299 TSSC4Q9Y5U2 329 aaPredicted RBP9.99□□□□□ -0.81
LSM8-201ENST00000249299 C2CD3Q4AC94 2353 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 A0A1W2PPV4 95 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 ZNF705EA8MWA4 302 aaPredicted RBP9.98□□□□□ -0.81
LSM8-201ENST00000249299 I3L521 148 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 HBE1P02100 147 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 HSPB1P04792 205 aaKnown RBP9.98□□□□□ -0.81
LSM8-201ENST00000249299 ZP3P21754 424 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 TCTEX1D4Q5JR98 221 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 C10orf99Q6UWK7 81 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 LYPD6BQ8NI32 183 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 RNF125Q96EQ8 232 aa9.98□□□□□ -0.81
LSM8-201ENST00000249299 MRPL27Q9P0M9 148 aaKnown RBP9.98□□□□□ -0.81
LSM8-201ENST00000249299 CTXND1A0A1B0GTU2 59 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 NUDT19A8MXV4 375 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 COX7A2P2O60397 106 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 IGHV3-23P01764 117 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 NMBP08949 121 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 ELLP55199 621 aaPredicted RBP9.97□□□□□ -0.81
LSM8-201ENST00000249299 TAS2R45P59539 299 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 RAB2AP61019 212 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 PMS2P11Q13670 270 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 FAM106AQ4KMX7 169 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 FAM74A1Q5RGS3 127 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 STXBP6Q8NFX7 210 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 RCC1LQ96I51 464 aaKnown RBP9.97□□□□□ -0.81
LSM8-201ENST00000249299 PUS1Q9Y606 427 aaKnown RBP eCLIP9.97□□□□□ -0.81
LSM8-201ENST00000249299 S4R3C0 116 aa9.97□□□□□ -0.81
LSM8-201ENST00000249299 JMJD1CQ15652 2540 aa9.96□□□□□ -0.81
LSM8-201ENST00000249299 K7EMT4 169 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 IGHV3-11P01762 117 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 IL4P05112 153 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 H2AFB1P0C5Y9 115 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 GATA2P23769 480 aaPredicted RBP9.96□□□□□ -0.82
LSM8-201ENST00000249299 CDC34P49427 236 aaPredicted RBP9.96□□□□□ -0.82
LSM8-201ENST00000249299 DEFA5Q01523 94 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 C10orf113Q5VZT2 155 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 TOMM20LQ6UXN7 152 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 LCNL1Q6ZST4 164 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 FAM213BQ8TBF2 198 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 TMEM37Q8WXS4 190 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 GNB4Q9HAV0 340 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 MED9Q9NWA0 146 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 HIGD1AQ9Y241 93 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 RFNGQ9Y644 331 aa9.96□□□□□ -0.82
LSM8-201ENST00000249299 LGALS9O00182 355 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms