RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 OR10X1Q8NGY0 326 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 ZNF596Q8TC21 504 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 C18orf32Q8TCD1 76 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 GRAMD2BQ96HH9 432 aa12.5□□□□□ -0.41
CTSD-201ENST00000236671 MYCNOSP40205 109 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 TMEM108Q6UXF1 575 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 NUDT10Q8NFP7 164 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 ST6GALNAC6Q969X2 333 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 NUDT11Q96G61 164 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 TMEM68Q96MH6 324 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 C7orf69Q9H7B7 122 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 CELSR2Q9HCU4 2923 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 FAM19A2Q8N3H0 131 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 LINC00311Q8N616 119 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 C8orf31Q8N9H6 132 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 NUP35Q8NFH5 326 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 FAM57AQ8TBR7 257 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 MRPL27Q9P0M9 148 aaKnown RBP12.49□□□□□ -0.41
CTSD-201ENST00000236671 WASHC3Q9Y3C0 194 aa12.49□□□□□ -0.41
CTSD-201ENST00000236671 A0A1W2PPI3 338 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 GNLYP22749 145 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 SUB1P53999 127 aaKnown RBP eCLIP12.48□□□□□ -0.411e-10■□□□□ 9.9
CTSD-201ENST00000236671 PRRX1P54821 245 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 MFAP2P55001 183 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 CASP6P55212 293 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 MRGPRG-AS1Q2M3A8 158 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 ZNF841Q6ZN19 808 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 H1FXQ92522 213 aaKnown RBP12.48□□□□□ -0.41
CTSD-201ENST00000236671 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 TPSG1Q9NRR2 321 aa12.48□□□□□ -0.41
CTSD-201ENST00000236671 PPIAL4EA0A075B759 164 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 PPIAL4DF5H284 164 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 TMEM178BH3BS89 294 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 PLAUP00749 431 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 PPIAL4FP0DN26 164 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 GNG5P63218 68 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 SPATA45Q537H7 98 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 LINC00305Q7Z4B0 112 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 RITA1Q96K30 269 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 TMEM208Q9BTX3 173 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 PPIAL4AQ9Y536 164 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 DPRXA6NFQ7 191 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 C22orf46C9J442 243 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 TNFRSF13BO14836 293 aaPredicted RBP12.47□□□□□ -0.41
CTSD-201ENST00000236671 ZNF137PP52743 207 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 LYPD2Q6UXB3 125 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 WFDC8Q8IUA0 241 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 SAP30LQ9HAJ7 183 aa12.47□□□□□ -0.41
CTSD-201ENST00000236671 SLC25A17O43808 307 aa12.46□□□□□ -0.41
CTSD-201ENST00000236671 MOSP00540 346 aa12.46□□□□□ -0.41
CTSD-201ENST00000236671 PRR27Q6MZM9 219 aa12.46□□□□□ -0.41
CTSD-201ENST00000236671 C19orf35Q6ZS72 473 aa12.46□□□□□ -0.41
CTSD-201ENST00000236671 LPAR2Q9HBW0 351 aa12.46□□□□□ -0.41
CTSD-201ENST00000236671 ARFGEF3Q5TH69 2177 aa12.46□□□□□ -0.42
CTSD-201ENST00000236671 DLEU1O43261 78 aa12.46□□□□□ -0.42
CTSD-201ENST00000236671 NTF3P20783 257 aa12.46□□□□□ -0.42
CTSD-201ENST00000236671 DLX6P56179 175 aa12.46□□□□□ -0.42
CTSD-201ENST00000236671 BSPH1Q075Z2 132 aa12.46□□□□□ -0.42
CTSD-201ENST00000236671 KLF5Q13887 457 aaPredicted RBP12.46□□□□□ -0.42
CTSD-201ENST00000236671 CHRDL1Q9BU40 450 aa12.46□□□□□ -0.42
CTSD-201ENST00000236671 CTSZQ9UBR2 303 aa12.46□□□□□ -0.42
CTSD-201ENST00000236671 CSMD1Q96PZ7 3565 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 IGLC7A0M8Q6 106 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 CORTO00230 105 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 NDUFB3O43676 98 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 OR2J3O76001 311 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 CRYGCP07315 174 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 BATFQ16520 125 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 VMA21Q3ZAQ7 101 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 PVRIGQ6DKI7 326 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 TNFRSF19Q9NS68 423 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
CTSD-201ENST00000236671 A0A0G2JNJ9 132 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 VWC2LB2RUY7 222 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 IGLC2P0DOY2 106 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 IGLC3P0DOY3 106 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 HIST1H1EP10412 219 aaKnown RBP12.44□□□□□ -0.42
CTSD-201ENST00000236671 LOXP28300 417 aaPredicted RBP12.44□□□□□ -0.42
CTSD-201ENST00000236671 GAGE1Q13065 139 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 TNXAQ16473 311 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 LRRC10Q5BKY1 277 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 PERPQ96FX8 193 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 Q9UFV3 132 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 KLF12Q9Y4X4 402 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 A0A1B0GXF2 115 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 C16orf97H3BN30 126 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 SLC25A5P05141 298 aaKnown RBP12.44□□□□□ -0.42
CTSD-201ENST00000236671 THBDP07204 575 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 ORM2P19652 201 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 UBE2G1P62253 170 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 OR1B1Q8NGR6 318 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 CCL17Q92583 94 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 BORCS7Q96B45 105 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 ALKBH7Q9BT30 221 aaPredicted RBP12.44□□□□□ -0.42
CTSD-201ENST00000236671 UQCR10Q9UDW1 63 aa12.44□□□□□ -0.42
CTSD-201ENST00000236671 DOPEY2Q9Y3R5 2298 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms