RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 STRCP1A6NGW2 1772 aa9.32□□□□□ -0.92
MSH6-201ENST00000234420 MGST3O14880 152 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 MRPS18AQ9NVS2 196 aaKnown RBP9.31□□□□□ -0.92
MSH6-201ENST00000234420 OSR1Q8TAX0 266 aaPredicted RBP9.31□□□□□ -0.92
MSH6-201ENST00000234420 COLCA2A8K830 154 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 RPL39P5Q59GN2 51 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 OR5P3Q8WZ94 311 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 QSER1Q2KHR3 1735 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 GATA2P23769 480 aaPredicted RBP9.31□□□□□ -0.92
MSH6-201ENST00000234420 BHLHA9Q7RTU4 235 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 Q9H3A6 140 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 C22orf46C9J442 243 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 TIAF1O95411 115 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 PLPPR1Q8TBJ4 325 aa9.31□□□□□ -0.92
MSH6-201ENST00000234420 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 CD5LO43866 347 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 IGLV2-23P01705 113 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 EGR4Q05215 589 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 NABP1Q96AH0 204 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 GAGE12HA6NDE8 117 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 PMVKQ15126 192 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 TCTEX1D4Q5JR98 221 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 Q6AWC8 147 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 TRAV12-1A0A0B4J245 112 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 RS1O15537 224 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 SLC25A16P16260 332 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 ZIC1Q15915 447 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 ZAR1Q86SH2 424 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
MSH6-201ENST00000234420 GAGE7O76087 117 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 GAGE12FP0CL80 117 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 GAGE12GP0CL81 117 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 GAGE12IP0CL82 117 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 CHAC1Q9BUX1 264 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 RBBP6Q7Z6E9 1792 aaKnown RBP9.3□□□□□ -0.92
MSH6-201ENST00000234420 E9PQ18 207 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 ZNF146Q15072 292 aa9.3□□□□□ -0.92
MSH6-201ENST00000234420 MORN3Q6PF18 240 aaPredicted RBP9.29□□□□□ -0.92
MSH6-201ENST00000234420 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 TMEM174Q8WUU8 243 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 DTX4Q9Y2E6 619 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 CIARTQ8N365 385 aaPredicted RBP9.29□□□□□ -0.92
MSH6-201ENST00000234420 ZNF721Q8TF20 911 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 LY6HO94772 140 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 FSTP19883 344 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 ETDBQ3ZM63 59 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 FAM90A2PQ658T7 463 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 TRAV14DV4A0A0A6YYC5 116 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 CELA3BP08861 270 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 J3QKU1 62 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 DLL3Q9NYJ7 618 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 C21orf62Q9NYP8 219 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 ANAPC10Q9UM13 185 aa9.29□□□□□ -0.92
MSH6-201ENST00000234420 TMEM8BA6NDV4 472 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 COX5BP10606 129 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 AMELYQ99218 206 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 WDR81Q562E7 1941 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 C3orf79P0CE67 100 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 CRYBA2P53672 197 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 NDPQ00604 133 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 ORMDL2Q53FV1 153 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 SAP25Q8TEE9 199 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 Q9HAA7 133 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 TRBV5-5A0A0J9YX44 114 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 K7EP13 123 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 HAMPP81172 84 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 MUC4Q99102 2169 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 OR9G9P0C7N8 305 aa9.28□□□□□ -0.92
MSH6-201ENST00000234420 KLF17Q5JT82 389 aaPredicted RBP9.28□□□□□ -0.92
MSH6-201ENST00000234420 SF3B5Q9BWJ5 86 aaKnown RBP9.28□□□□□ -0.92
MSH6-201ENST00000234420 A8MWP6 167 aa9.27□□□□□ -0.92
MSH6-201ENST00000234420 C1QCP02747 245 aa9.27□□□□□ -0.92
MSH6-201ENST00000234420 THBDP07204 575 aa9.27□□□□□ -0.92
MSH6-201ENST00000234420 CCL20P78556 96 aa9.27□□□□□ -0.92
MSH6-201ENST00000234420 TCF15Q12870 199 aa9.27□□□□□ -0.92
MSH6-201ENST00000234420 C8orf82Q6P1X6 216 aaPredicted RBP9.27□□□□□ -0.92
MSH6-201ENST00000234420 RNASE6Q93091 150 aaKnown RBP9.27□□□□□ -0.92
MSH6-201ENST00000234420 EFEMP2O95967 443 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 VMO1Q7Z5L0 202 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 GCSAMQ8N6F7 178 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 SNHG12Q9BXW3 62 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 LAGE3Q14657 143 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 THAP8Q8NA92 274 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 CTSBP07858 339 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 LINC00477Q96M19 166 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 C1QAP02745 245 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 FCN3O75636 299 aa9.27□□□□□ -0.93
MSH6-201ENST00000234420 TMEM144Q7Z5S9 345 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 DEPPQ9NTK1 212 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 PCNX1Q96RV3 2341 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 PIN1P1O15428 100 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 ZNF501Q96CX3 271 aaPredicted RBP9.26□□□□□ -0.93
MSH6-201ENST00000234420 COX6A1P12074 109 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
MSH6-201ENST00000234420 F8WEM9 126 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms