RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 NCBP2LA6PVI3 153 aaKnown RBP12.6□□□□□ -0.39
ITGA4-201ENST00000233573 IGKV1-17P01599 117 aa12.6□□□□□ -0.39
ITGA4-201ENST00000233573 RPL35P42766 123 aaKnown RBP12.6□□□□□ -0.39
ITGA4-201ENST00000233573 TTC9CQ8N5M4 171 aa12.6□□□□□ -0.39
ITGA4-201ENST00000233573 OR1B1Q8NGR6 318 aa12.6□□□□□ -0.39
ITGA4-201ENST00000233573 FANCD2OSQ96PS1 177 aa12.6□□□□□ -0.39
ITGA4-201ENST00000233573 PAXXQ9BUH6 204 aa12.6□□□□□ -0.39
ITGA4-201ENST00000233573 OR51M1Q9H341 326 aa12.6□□□□□ -0.39
ITGA4-201ENST00000233573 LY96Q9Y6Y9 160 aa12.6□□□□□ -0.39
ITGA4-201ENST00000233573 GCN1Q92616 2671 aaKnown RBP12.59□□□□□ -0.39
ITGA4-201ENST00000233573 EGR2P11161 476 aaPredicted RBP12.59□□□□□ -0.39
ITGA4-201ENST00000233573 ORM2P19652 201 aa12.59□□□□□ -0.39
ITGA4-201ENST00000233573 CRYBB3P26998 211 aa12.59□□□□□ -0.39
ITGA4-201ENST00000233573 GALR1P47211 349 aa12.59□□□□□ -0.39
ITGA4-201ENST00000233573 SNRPEP62304 92 aaKnown RBP12.59□□□□□ -0.39
ITGA4-201ENST00000233573 OR5T1Q8NG75 326 aa12.59□□□□□ -0.39
ITGA4-201ENST00000233573 IGLV11-55A0A075B6I3 123 aa12.58□□□□□ -0.39
ITGA4-201ENST00000233573 IGHV3OR16-10A0A075B7F0 116 aa12.58□□□□□ -0.39
ITGA4-201ENST00000233573 IGHV7-81A0A0B4J1V7 117 aa12.58□□□□□ -0.39
ITGA4-201ENST00000233573 PCP4L1A6NKN8 68 aa12.58□□□□□ -0.39
ITGA4-201ENST00000233573 PHOX2AO14813 284 aa12.58□□□□□ -0.39
ITGA4-201ENST00000233573 NPFFO15130 113 aa12.58□□□□□ -0.39
ITGA4-201ENST00000233573 FAM106CPP0CH98 169 aa12.58□□□□□ -0.39
ITGA4-201ENST00000233573 PSG1P11464 419 aa12.58□□□□□ -0.39
ITGA4-201ENST00000233573 K7EN84 100 aa12.58□□□□□ -0.4
ITGA4-201ENST00000233573 HYPMO75409 117 aa12.58□□□□□ -0.4
ITGA4-201ENST00000233573 SUMO1P63165 101 aaKnown RBP12.58□□□□□ -0.4
ITGA4-201ENST00000233573 TIGITQ495A1 244 aa12.58□□□□□ -0.4
ITGA4-201ENST00000233573 KLF17Q5JT82 389 aaPredicted RBP12.58□□□□□ -0.4
ITGA4-201ENST00000233573 NECAP1Q8NC96 275 aa12.58□□□□□ -0.4
ITGA4-201ENST00000233573 PSMG3-AS1Q96PY0 264 aa12.58□□□□□ -0.4
ITGA4-201ENST00000233573 ZANQ9Y493 2812 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 ABCA1O95477 2261 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 HLA-DRB1P01911 266 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 MYCNOSP40205 109 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 STXBP6Q8NFX7 210 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 SFRP2Q96HF1 295 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 OR5B12Q96R08 314 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 UBE2CO00762 179 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 GGCTO75223 188 aaKnown RBP12.57□□□□□ -0.4
ITGA4-201ENST00000233573 TRGC2P03986 189 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 BRS3P32247 399 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 SRP14P37108 136 aaKnown RBP12.57□□□□□ -0.4
ITGA4-201ENST00000233573 TEX38Q6PEX7 206 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 RBM14Q96PK6 669 aaKnown RBP12.57□□□□□ -0.4
ITGA4-201ENST00000233573 C1RLQ9NZP8 487 aa12.57□□□□□ -0.4
ITGA4-201ENST00000233573 HELTA6NFD8 242 aa12.56□□□□□ -0.4
ITGA4-201ENST00000233573 PPP1R2P9O14990 202 aa12.56□□□□□ -0.4
ITGA4-201ENST00000233573 TGOLN2O43493 480 aa12.56□□□□□ -0.4
ITGA4-201ENST00000233573 DSCR9P59020 149 aa12.56□□□□□ -0.4
ITGA4-201ENST00000233573 IMMP2LQ96T52 175 aa12.56□□□□□ -0.4
ITGA4-201ENST00000233573 RASL11BQ9BPW5 248 aa12.56□□□□□ -0.4
ITGA4-201ENST00000233573 S100A6P06703 90 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 GP9P14770 177 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 S100PP25815 95 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 ZNF329Q86UD4 541 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 ZNF48Q96MX3 618 aaPredicted RBP12.55□□□□□ -0.4
ITGA4-201ENST00000233573 MRPL27Q9P0M9 148 aaKnown RBP12.55□□□□□ -0.4
ITGA4-201ENST00000233573 A0A096LNT2 108 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 F8W735 103 aaPredicted RBP12.55□□□□□ -0.4
ITGA4-201ENST00000233573 MSMBP08118 114 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 DEFB113Q30KQ7 82 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 CENPWQ5EE01 88 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 IGF2BP2-AS1Q96M15 143 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 SRD5A3Q9H8P0 318 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 HIGD1AQ9Y241 93 aa12.55□□□□□ -0.4
ITGA4-201ENST00000233573 MDFIC2A0A1B0GVS7 189 aa12.54□□□□□ -0.4
ITGA4-201ENST00000233573 AP4M1O00189 453 aa12.54□□□□□ -0.4
ITGA4-201ENST00000233573 IGLV2-8P01709 118 aa12.54□□□□□ -0.4
ITGA4-201ENST00000233573 HNF1AP20823 631 aa12.54□□□□□ -0.4
ITGA4-201ENST00000233573 KLK9Q2XQG4 91 aa12.54□□□□□ -0.4
ITGA4-201ENST00000233573 C12orf57Q99622 126 aa12.54□□□□□ -0.4
ITGA4-201ENST00000233573 KLK9Q9UKQ9 250 aa12.54□□□□□ -0.4
ITGA4-201ENST00000233573 ZNF469Q96JG9 3925 aaPredicted RBP12.54□□□□□ -0.4
ITGA4-201ENST00000233573 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 IGHV1-69DA0A0B4J2H0 117 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 IGHV1-69P01742 117 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 TYMSP04818 313 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 RD3LP0DJH9 198 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 SLC25A16P16260 332 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 AKR1D1P51857 326 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 LYZP61626 148 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 FOXL1Q12952 345 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
ITGA4-201ENST00000233573 BRD3OSQ6XYD6 125 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 HIST1H2BMQ99879 126 aa12.53□□□□□ -0.4
ITGA4-201ENST00000233573 SLC25A39Q9BZJ4 359 aaPredicted RBP12.53□□□□□ -0.4
ITGA4-201ENST00000233573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.53□□□□□ -0.4
ITGA4-201ENST00000233573 A0A1W2PPQ1 181 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms