RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 CPAMD8Q8IZJ3 1885 aa11.88□□□□□ -0.51
PRDM4-201ENST00000228437 KIR3DS1Q14943 382 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 EXOC3-AS1Q8N2X6 119 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 RNF138Q8WVD3 245 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 WFDC12Q8WWY7 111 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 NHP2Q9NX24 153 aaKnown RBP11.87□□□□□ -0.51
PRDM4-201ENST00000228437 PROCRQ9UNN8 238 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 NBEAQ8NFP9 2946 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 IGHV3-35A0A0C4DH35 117 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 K7EMI3 77 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 CD5LO43866 347 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 TNFSF15O95150 251 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 SSBP2P81877 361 aaPredicted RBP11.87□□□□□ -0.51
PRDM4-201ENST00000228437 CD69Q07108 199 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 NRN1LQ496H8 165 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 INO80CQ6PI98 192 aaPredicted RBP11.87□□□□□ -0.51
PRDM4-201ENST00000228437 DUX4L9Q6RFH8 374 aaPredicted RBP11.87□□□□□ -0.51
PRDM4-201ENST00000228437 RBPMS2Q6ZRY4 209 aaKnown RBP11.87□□□□□ -0.51
PRDM4-201ENST00000228437 FER1L6-AS2Q96M78 137 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 CSTL1Q9H114 145 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 DSCAML1Q8TD84 2053 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 CKS2P33552 79 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 WDR31Q8NA23 367 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 Q8TCH9 128 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 IGHV3OR16-8A0A075B7F1 116 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 ACP1P24666 158 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 VMA21Q3ZAQ7 101 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 UTF1Q5T230 341 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 TMEM105Q8N8V8 129 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
PRDM4-201ENST00000228437 LY96Q9Y6Y9 160 aa11.87□□□□□ -0.51
PRDM4-201ENST00000228437 SMIM27A0A1W2PRY6 76 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 CCL3L1P16619 93 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 COX7A1P24310 79 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 Q8N976 141 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 C11orf52Q96A22 123 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 ZNF414Q96IQ9 312 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 IQCF6A8MYZ5 107 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 K7EP13 123 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 KLK10O43240 276 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 ORM1P02763 201 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 ESDP10768 282 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 LCNL1Q6ZST4 164 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 Q9H3A6 140 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 CHODLQ9H9P2 273 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 A0A1B0GUT8 65 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 TWIST1Q15672 202 aa11.86□□□□□ -0.51
PRDM4-201ENST00000228437 IGKV3D-15A0A087WSY6 115 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 K7ESF4 209 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 UPK2O00526 184 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 ERVK11-1P61568 191 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 TIMM23BQ5SRD1 257 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 GDF5OSQ5U4N7 250 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 OR4F17Q8NGA8 305 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 MBNL2Q5VZF2 373 aaKnown RBP11.85□□□□□ -0.51
PRDM4-201ENST00000228437 J3KRW8 73 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 NCR2O95944 276 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 PET117Q6UWS5 81 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 FAM214BQ7L5A3 538 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 MRPL32Q9BYC8 188 aaKnown RBP11.85□□□□□ -0.51
PRDM4-201ENST00000228437 KLK15Q9H2R5 256 aa11.85□□□□□ -0.51
PRDM4-201ENST00000228437 TOMM40O96008 361 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 PAX2Q02962 417 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 IGKV1OR2-108A0A075B7D4 117 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 TMEM265A0A087WTH1 108 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 SMKR1H3BMG3 65 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 MEF2CQ06413 473 aaPredicted RBP11.84□□□□□ -0.51
PRDM4-201ENST00000228437 DEFB125Q8N687 156 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 DYNLRB1Q9NP97 96 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 SMIM13P0DJ93 91 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 RNF7Q9UBF6 113 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 ATG2AQ2TAZ0 1938 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 PROP1O75360 226 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 ZNF788Q6ZQV5 615 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 SPATA12Q7Z6I5 190 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 HIGD1AQ9Y241 93 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
PRDM4-201ENST00000228437 IGKV1D-17A0A075B6S4 117 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 MMP23AO75900 390 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 PRCDQ00LT1 54 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 PRELID3AQ96N28 172 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 TMEM160Q9NX00 188 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 RABAC1Q9UI14 185 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 TGFAP01135 160 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 ARMS2P0C7Q2 107 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 IFI27P40305 119 aaPredicted RBP11.83□□□□□ -0.52
PRDM4-201ENST00000228437 PRR20EP86478 221 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 PRR20CP86479 221 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 PRR20DP86480 221 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 PRR20BP86481 221 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 PRR20AP86496 221 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 ZNF329Q86UD4 541 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 STXBP6Q8NFX7 210 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 H0YJW9 148 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 M0R296 226 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 ZNF257Q9Y2Q1 563 aa11.83□□□□□ -0.52
PRDM4-201ENST00000228437 C2orf70A6NJV1 201 aa11.82□□□□□ -0.52
PRDM4-201ENST00000228437 C19orf24Q9BVV8 132 aa11.82□□□□□ -0.52
PRDM4-201ENST00000228437 COL25A1Q9BXS0 654 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms