RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 J3QT63 122 aa11.1□□□□□ -0.63
GABPB1-201ENST00000220429 KIR2DS4P43632 304 aa11.1□□□□□ -0.63
GABPB1-201ENST00000220429 XGP55808 180 aa11.1□□□□□ -0.63
GABPB1-201ENST00000220429 KIR2DS1Q14954 304 aa11.1□□□□□ -0.63
GABPB1-201ENST00000220429 ADTRPQ96IZ2 230 aa11.1□□□□□ -0.63
GABPB1-201ENST00000220429 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
GABPB1-201ENST00000220429 SRSF8Q9BRL6 282 aaKnown RBP11.1□□□□□ -0.63
GABPB1-201ENST00000220429 COL25A1Q9BXS0 654 aaPredicted RBP11.1□□□□□ -0.63
GABPB1-201ENST00000220429 KIR2DL2P43627 348 aaPredicted RBP11.09□□□□□ -0.63
GABPB1-201ENST00000220429 CATR1Q13166 79 aa11.09□□□□□ -0.63
GABPB1-201ENST00000220429 ALKBH6Q3KRA9 238 aa11.09□□□□□ -0.63
GABPB1-201ENST00000220429 PCSK4Q6UW60 755 aa11.09□□□□□ -0.63
GABPB1-201ENST00000220429 DLL3Q9NYJ7 618 aa11.09□□□□□ -0.63
GABPB1-201ENST00000220429 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
GABPB1-201ENST00000220429 GCHFRP30047 84 aa11.09□□□□□ -0.63
GABPB1-201ENST00000220429 HEATR1Q9H583 2144 aaKnown RBP11.09□□□□□ -0.63
GABPB1-201ENST00000220429 TRBV6-6A0A0A6YYG2 114 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 TAS2R45P59539 299 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 Q6P435 159 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 Q6ZT83 130 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 OSR1Q8TAX0 266 aaPredicted RBP11.08□□□□□ -0.64
GABPB1-201ENST00000220429 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 RTL8AQ9BWD3 113 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 RIF1Q5UIP0 2472 aaKnown RBP11.08□□□□□ -0.64
GABPB1-201ENST00000220429 H3BMG7 143 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 RTL8BQ17RB0 113 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 CNEP1R1Q8N9A8 125 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 TMEM116Q8NCL8 245 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 INSIG2Q9Y5U4 225 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 TRAV17A0A0B4J275 112 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 CAMPP49913 170 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 C9orf106Q8NAJ2 232 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 FAM168AQ92567 244 aa11.08□□□□□ -0.64
GABPB1-201ENST00000220429 SSBP3Q9BWW4 388 aaPredicted RBP11.08□□□□□ -0.64
GABPB1-201ENST00000220429 MGAQ8IWI9 3026 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 CT45A6P0DMU7 189 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 CT45A5P0DMU8 189 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 CT45A7P0DMV0 189 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 DEFB109BQ30KR1 87 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 GAGE13Q4V321 117 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 CT45A1Q5HYN5 189 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 CT45A3Q8NHU0 189 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 WDR83OSQ9Y284 106 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 IGHV3-64DA0A0J9YX35 117 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 APOMO95445 188 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 NHLRC4P0CG21 123 aaPredicted RBP11.07□□□□□ -0.64
GABPB1-201ENST00000220429 AREGP15514 252 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 FOXA3P55318 350 aaPredicted RBP11.07□□□□□ -0.64
GABPB1-201ENST00000220429 ERVK11-1P61568 191 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 FOXI1Q12951 378 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 ZNF146Q15072 292 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 LCNL1Q6ZST4 164 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 NUP35Q8NFH5 326 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 VPREB3Q9UKI3 123 aa11.07□□□□□ -0.64
GABPB1-201ENST00000220429 A0A087WX48 190 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 FAM90A27PA6NNH2 459 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 M0QXV9 152 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 GAGE7O76087 117 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 GAGE4Q13068 117 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 TM4SF20Q53R12 229 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 ZFAND6Q6FIF0 208 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 CACNA1DQ01668 2161 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 IQCF6A8MYZ5 107 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 MPV17P39210 176 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 WDR31Q8NA23 367 aa11.06□□□□□ -0.64
GABPB1-201ENST00000220429 NPIPB5A8MRT5 1133 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 OR2H2O95918 312 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 FOXF2Q12947 444 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 Q6AWC8 147 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 FGFRL1Q8N441 504 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 AKAP13Q12802 2813 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 TEX50A0A1B0GTY4 177 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 IGKV3-15P01624 115 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 IGLV2-8P01709 118 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 OPRK1P41145 380 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 Q8IYB0 196 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 KLF14Q8TD94 323 aaPredicted RBP11.05□□□□□ -0.64
GABPB1-201ENST00000220429 POLDIP2Q9Y2S7 368 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 TIMM8BQ9Y5J9 83 aaPredicted RBP11.05□□□□□ -0.64
GABPB1-201ENST00000220429 DIDO1Q9BTC0 2240 aaKnown RBP11.05□□□□□ -0.64
GABPB1-201ENST00000220429 NBEAQ8NFP9 2946 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 BSNQ9UPA5 3926 aa11.05□□□□□ -0.64
GABPB1-201ENST00000220429 A0A1B0GWB2 263 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 E9PLD3 99 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 K7ERJ3 54 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 ZG16O60844 167 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 GCSHP23434 173 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 NHLRC2Q8NBF2 726 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 PRO0461Q9UI25 63 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 FXYD2P54710 66 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 ZNF497Q6ZNH5 498 aa11.04□□□□□ -0.64
GABPB1-201ENST00000220429 PHLDA1Q8WV24 401 aaPredicted RBP11.04□□□□□ -0.64
GABPB1-201ENST00000220429 IL1F10Q8WWZ1 152 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms