RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TMEM178BH3BS89 294 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 SLC25A5P05141 298 aaKnown RBP13.88□□□□□ -0.19
USB1-201ENST00000219281 MYCNOSP40205 109 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 PRR31Q5SQ13 230 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 HCP5Q6MZN7 132 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 ST6GALNAC6Q969X2 333 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 C7orf69Q9H7B7 122 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 UQCR10Q9UDW1 63 aa13.88□□□□□ -0.19
USB1-201ENST00000219281 K7ENP7 123 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 PRRG2O14669 202 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 NDUFB3O43676 98 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 ENSAO43768 121 aaKnown RBP13.87□□□□□ -0.19
USB1-201ENST00000219281 HYPMO75409 117 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 IGLC2P0DOY2 106 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 IGLC3P0DOY3 106 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 HIST1H1EP10412 219 aaKnown RBP13.87□□□□□ -0.19
USB1-201ENST00000219281 VMA21Q3ZAQ7 101 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 LCN12Q6JVE5 192 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 CLEC7AQ9BXN2 247 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 TNFRSF19Q9NS68 423 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 IGHV3-72A0A0B4J1Y9 119 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 PGPA6NDG6 321 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 HSBP1O75506 76 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 PRR30Q53SZ7 412 aaPredicted RBP13.87□□□□□ -0.19
USB1-201ENST00000219281 PERPQ96FX8 193 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 TXN2Q99757 166 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
USB1-201ENST00000219281 PTPRQQ9UMZ3 2332 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 VWC2LB2RUY7 222 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 BSPH1Q075Z2 132 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 MRGPRG-AS1Q2M3A8 158 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 MAJINQ3KP22 176 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 LRRC10Q5BKY1 277 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 COL5A1-AS1Q5SY13 56 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 FAM71F2Q6NXP2 309 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 Q6ZN92 141 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 LINC00311Q8N616 119 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 ALKBH7Q9BT30 221 aaPredicted RBP13.86□□□□□ -0.19
USB1-201ENST00000219281 SH3BGRL2Q9UJC5 107 aa13.86□□□□□ -0.19
USB1-201ENST00000219281 IGHV3-21A0A0B4J1V1 117 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 APELAP0DMC3 54 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 GAGE1Q13065 139 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 KLF5Q13887 457 aaPredicted RBP13.85□□□□□ -0.19
USB1-201ENST00000219281 RNASEKQ6P5S7 137 aaKnown RBP13.85□□□□□ -0.19
USB1-201ENST00000219281 ZNF596Q8TC21 504 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 CTSZQ9UBR2 303 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 ROS1P08922 2347 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 C16orf97H3BN30 126 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 M0R2Z0 102 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 GFRALQ6UXV0 394 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 TCF24Q7RTU0 167 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 ZNF835Q9Y2P0 537 aa13.85□□□□□ -0.19
USB1-201ENST00000219281 FAM181BA6NEQ2 426 aa13.84□□□□□ -0.19
USB1-201ENST00000219281 H3BTX0 84 aa13.84□□□□□ -0.19
USB1-201ENST00000219281 HNRNPA3P51991 378 aaKnown RBP13.84□□□□□ -0.19
USB1-201ENST00000219281 STXBP6Q8NFX7 210 aa13.84□□□□□ -0.19
USB1-201ENST00000219281 TLN1Q9Y490 2541 aaKnown RBP13.84□□□□□ -0.19
USB1-201ENST00000219281 IGLC7A0M8Q6 106 aa13.84□□□□□ -0.19
USB1-201ENST00000219281 TNFRSF13BO14836 293 aaPredicted RBP13.84□□□□□ -0.19
USB1-201ENST00000219281 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
USB1-201ENST00000219281 LOXP28300 417 aaPredicted RBP13.84□□□□□ -0.19
USB1-201ENST00000219281 ETFRF1Q6IPR1 90 aa13.84□□□□□ -0.19
USB1-201ENST00000219281 EBLN2Q6P2I7 272 aa13.84□□□□□ -0.19
USB1-201ENST00000219281 LINC00322Q6ZN03 302 aaPredicted RBP13.84□□□□□ -0.19
USB1-201ENST00000219281 C8orf31Q8N9H6 132 aa13.84□□□□□ -0.19
USB1-201ENST00000219281 OR2J3O76001 311 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 MC5RP33032 325 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 OR2D3Q8NGH3 330 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 GPR82Q96P67 336 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 NAV3Q8IVL0 2385 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 A0A1B0GXF2 115 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 THBDP07204 575 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 CRYGCP07315 174 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 FAM87AP0C7U9 286 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 DLX6P56179 175 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 LEMD1Q68G75 181 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 KLHDC1Q8N7A1 406 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 JKAMPQ9P055 326 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 KLF12Q9Y4X4 402 aa13.83□□□□□ -0.2
USB1-201ENST00000219281 KALRNO60229 2985 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 CNTFRP26992 372 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 ZNF137PP52743 207 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 Q56UQ5 140 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 ATP5L2Q7Z4Y8 100 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 STPG4Q8N801 248 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 TRGV9Q99603 122 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 RPP21Q9H633 154 aaKnown RBP13.82□□□□□ -0.2
USB1-201ENST00000219281 LAMTOR2Q9Y2Q5 125 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 RELNP78509 3460 aa13.82□□□□□ -0.2
USB1-201ENST00000219281 LGALS7P47929 136 aa13.81□□□□□ -0.2
USB1-201ENST00000219281 PMCHL1Q16048 86 aa13.81□□□□□ -0.2
USB1-201ENST00000219281 MLST8Q9BVC4 326 aa13.81□□□□□ -0.2
USB1-201ENST00000219281 GSX1Q9H4S2 264 aaPredicted RBP13.81□□□□□ -0.2
USB1-201ENST00000219281 IGHV1-8P0DP01 117 aa13.81□□□□□ -0.2
USB1-201ENST00000219281 BTF3P20290 206 aaKnown RBP13.81□□□□□ -0.2
USB1-201ENST00000219281 CD24P25063 80 aa13.81□□□□□ -0.2
USB1-201ENST00000219281 DLX1P56177 255 aa13.81□□□□□ -0.2
USB1-201ENST00000219281 OR8B3Q8NGG8 313 aa13.81□□□□□ -0.2
USB1-201ENST00000219281 OR8B2Q96RD0 313 aa13.81□□□□□ -0.2
USB1-201ENST00000219281 GP9P14770 177 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms