RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 K7EN84 100 aa23.41■■□□□ 1.34
PABPN1-201ENST00000216727 RD3LP0DJH9 198 aa23.41■■□□□ 1.34
PABPN1-201ENST00000216727 GNG4P50150 75 aa23.41■■□□□ 1.34
PABPN1-201ENST00000216727 KLF17Q5JT82 389 aaPredicted RBP23.41■■□□□ 1.34
PABPN1-201ENST00000216727 ZNF843Q8N446 348 aa23.41■■□□□ 1.34
PABPN1-201ENST00000216727 ZFYVE26Q68DK2 2539 aa23.41■■□□□ 1.34
PABPN1-201ENST00000216727 CENPWQ5EE01 88 aa23.4■■□□□ 1.34
PABPN1-201ENST00000216727 ABCA2Q9BZC7 2435 aa23.4■■□□□ 1.34
PABPN1-201ENST00000216727 EGR2P11161 476 aaPredicted RBP23.4■■□□□ 1.34
PABPN1-201ENST00000216727 FOXL1Q12952 345 aa23.4■■□□□ 1.34
PABPN1-201ENST00000216727 MYCNOSP40205 109 aa23.39■■□□□ 1.34
PABPN1-201ENST00000216727 LYZP61626 148 aa23.39■■□□□ 1.34
PABPN1-201ENST00000216727 ZNF329Q86UD4 541 aa23.39■■□□□ 1.34
PABPN1-201ENST00000216727 OR10G8Q8NGN5 311 aa23.39■■□□□ 1.34
PABPN1-201ENST00000216727 TRAV30A0A087WSZ9 112 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 A0A1W2PPQ1 181 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 PHOX2AO14813 284 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 GP9P14770 177 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 AKR1D1P51857 326 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 FABP9Q0Z7S8 132 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 THYN1Q9P016 225 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 MRPL27Q9P0M9 148 aaKnown RBP23.38■■□□□ 1.33
PABPN1-201ENST00000216727 IGHV4-30-2A0A087WSY4 118 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 PPP5D1E7EU14 171 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 TYMSP04818 313 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 HNF1AP20823 631 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 BTF3L4Q96K17 158 aa23.38■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BKO60814 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 TOMM40O96008 361 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BJP06899 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BOP23527 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BBP33778 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BDP58876 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BCP62807 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST2H2BEQ16778 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST2H2BFQ5QNW6 126 aaPredicted RBP23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BHQ93079 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BNQ99877 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 HIST1H2BMQ99879 126 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 TAS2R60P59551 318 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 SLC25A39Q9BZJ4 359 aaPredicted RBP23.37■■□□□ 1.33
PABPN1-201ENST00000216727 CDC42EP3Q9UKI2 254 aa23.37■■□□□ 1.33
PABPN1-201ENST00000216727 ZNF462Q96JM2 2506 aa23.36■■□□□ 1.33
PABPN1-201ENST00000216727 NBEAP1P0C6P0 100 aa23.36■■□□□ 1.33
PABPN1-201ENST00000216727 PAX1P15863 534 aa23.36■■□□□ 1.33
PABPN1-201ENST00000216727 MFAP4P55083 255 aa23.36■■□□□ 1.33
PABPN1-201ENST00000216727 IGF2BP2-AS1Q96M15 143 aa23.36■■□□□ 1.33
PABPN1-201ENST00000216727 IGHV1-69DA0A0B4J2H0 117 aa23.35■■□□□ 1.33
PABPN1-201ENST00000216727 IGHV1-69P01742 117 aa23.35■■□□□ 1.33
PABPN1-201ENST00000216727 FAM3BP58499 235 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-201ENST00000216727 YPEL3P61236 119 aaPredicted RBP23.35■■□□□ 1.33
PABPN1-201ENST00000216727 LINC00518Q8N0U6 118 aa23.35■■□□□ 1.33
PABPN1-201ENST00000216727 TMEM14CQ9P0S9 112 aa23.35■■□□□ 1.33
PABPN1-201ENST00000216727 SGMS2Q8NHU3 365 aa23.35■■□□□ 1.33
PABPN1-201ENST00000216727 FRZBQ92765 325 aa23.35■■□□□ 1.33
PABPN1-201ENST00000216727 DSCR9P59020 149 aa23.34■■□□□ 1.33
PABPN1-201ENST00000216727 HSPB9Q9BQS6 159 aa23.34■■□□□ 1.33
PABPN1-201ENST00000216727 PEX7O00628 323 aa23.33■■□□□ 1.33
PABPN1-201ENST00000216727 GNG7O60262 68 aa23.33■■□□□ 1.33
PABPN1-201ENST00000216727 RANP62826 216 aaKnown RBP23.33■■□□□ 1.32
PABPN1-201ENST00000216727 CLEC12BQ2HXU8 276 aa23.33■■□□□ 1.32
PABPN1-201ENST00000216727 KLK9Q2XQG4 91 aa23.33■■□□□ 1.32
PABPN1-201ENST00000216727 ZNF491Q8N8L2 437 aa23.33■■□□□ 1.32
PABPN1-201ENST00000216727 C21orf62Q9NYP8 219 aa23.33■■□□□ 1.32
PABPN1-201ENST00000216727 KLK9Q9UKQ9 250 aa23.33■■□□□ 1.32
PABPN1-201ENST00000216727 GCGP01275 180 aa23.32■■□□□ 1.32
PABPN1-201ENST00000216727 IGLV2-8P01709 118 aa23.32■■□□□ 1.32
PABPN1-201ENST00000216727 TRGC1P0CF51 173 aa23.32■■□□□ 1.32
PABPN1-201ENST00000216727 CNN1P51911 297 aaKnown RBP23.32■■□□□ 1.32
PABPN1-201ENST00000216727 LEMD1Q68G75 181 aa23.32■■□□□ 1.32
PABPN1-201ENST00000216727 SPG11Q96JI7 2443 aa23.32■■□□□ 1.32
PABPN1-201ENST00000216727 F8W735 103 aaPredicted RBP23.32■■□□□ 1.32
PABPN1-201ENST00000216727 ZNF600Q6ZNG1 722 aa23.32■■□□□ 1.32
PABPN1-201ENST00000216727 FAM110DQ8TAY7 271 aaPredicted RBP23.32■■□□□ 1.32
PABPN1-201ENST00000216727 BLNKQ8WV28 456 aa23.32■■□□□ 1.32
PABPN1-201ENST00000216727 WI2-2373I1.2A0A1W2PRP0 233 aa23.31■■□□□ 1.32
PABPN1-201ENST00000216727 NDUFB8O95169 186 aa23.31■■□□□ 1.32
PABPN1-201ENST00000216727 HIST1H1BP16401 226 aaKnown RBP23.31■■□□□ 1.32
PABPN1-201ENST00000216727 RNF125Q96EQ8 232 aa23.31■■□□□ 1.32
PABPN1-201ENST00000216727 SHANK2-AS3Q9BTD1 123 aa23.31■■□□□ 1.32
PABPN1-201ENST00000216727 HOXA5P20719 270 aa23.3■■□□□ 1.32
PABPN1-201ENST00000216727 ERVFC1-1P60608 527 aa23.3■■□□□ 1.32
PABPN1-201ENST00000216727 SRSF1Q07955 248 aaKnown RBP eCLIP23.3■■□□□ 1.324e-11■□□□□ 10.8
PABPN1-201ENST00000216727 IL36BQ9NZH7 164 aa23.3■■□□□ 1.32
PABPN1-201ENST00000216727 EPDR1Q9UM22 224 aa23.3■■□□□ 1.32
PABPN1-201ENST00000216727 COX6B1P14854 86 aa23.3■■□□□ 1.32
PABPN1-201ENST00000216727 FCGR2BP31994 310 aaPredicted RBP23.3■■□□□ 1.32
PABPN1-201ENST00000216727 OR5I1Q13606 314 aa23.3■■□□□ 1.32
PABPN1-201ENST00000216727 TRAV9-1A0A075B6T8 112 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 TRAV40A0A0B4J280 105 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 H3BRN7 92 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 OR2J3O76001 311 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 MSMBP08118 114 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 NDUFA6P56556 154 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 TMEM68Q96MH6 324 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 MEGF9Q9H1U4 602 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 OSTCQ9NRP0 149 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 S4R3C0 116 aa23.29■■□□□ 1.32
PABPN1-201ENST00000216727 PGPA6NDG6 321 aa23.28■■□□□ 1.32
PABPN1-201ENST00000216727 SNRPCP09234 159 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms