RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
TGFBR3-201ENST00000212355 YPEL1O60688 119 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 CSRP2Q16527 193 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 TMEM167AQ8TBQ9 72 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 CYTL1Q9NRR1 136 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 ATP5LO75964 103 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 ZNF815PA8K554 130 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 FABP5P3A8MUU1 101 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 LINC00479Q96M42 142 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 NDUFS6O75380 124 aaKnown RBP11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 ERCC8Q13216 396 aa11.22□□□□□ -0.61
TGFBR3-201ENST00000212355 SLC25A39Q9BZJ4 359 aaPredicted RBP11.21□□□□□ -0.61
TGFBR3-201ENST00000212355 THBDP07204 575 aa11.21□□□□□ -0.61
TGFBR3-201ENST00000212355 C20orf204Q6ZNR8 217 aa11.21□□□□□ -0.61
TGFBR3-201ENST00000212355 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.21□□□□□ -0.61
TGFBR3-201ENST00000212355 CLPSP04118 112 aa11.21□□□□□ -0.61
TGFBR3-201ENST00000212355 CFAP161Q6P656 301 aa11.21□□□□□ -0.61
TGFBR3-201ENST00000212355 OR4X2Q8NGF9 303 aa11.21□□□□□ -0.61
TGFBR3-201ENST00000212355 NABP1Q96AH0 204 aa11.21□□□□□ -0.61
TGFBR3-201ENST00000212355 AMBPP02760 352 aa11.21□□□□□ -0.62
TGFBR3-201ENST00000212355 TMEM155Q4W5P6 130 aa11.21□□□□□ -0.62
TGFBR3-201ENST00000212355 GBF1Q92538 1859 aa11.21□□□□□ -0.62
TGFBR3-201ENST00000212355 LINC00473A8K010 186 aa11.21□□□□□ -0.62
TGFBR3-201ENST00000212355 WISP1O95388 367 aa11.21□□□□□ -0.62
TGFBR3-201ENST00000212355 LYPD2Q6UXB3 125 aa11.21□□□□□ -0.62
TGFBR3-201ENST00000212355 SIGLEC15Q6ZMC9 328 aa11.21□□□□□ -0.62
TGFBR3-201ENST00000212355 PRTN3P24158 256 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 SAMD13Q5VXD3 122 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 DOCK9Q9BZ29 2069 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 A0A0G2JRQ6 117 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 HBDP02042 147 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 CKS1BP61024 79 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 PSG1P11464 419 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 IGHV2-26A0A0B4J1V2 119 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 TRGV4A0A0C4DH28 118 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 IGKCP01834 107 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 RAB9AP51151 201 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 UBE2E2Q96LR5 201 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 SRSF7Q16629 238 aaKnown RBP eCLIP11.2□□□□□ -0.622e-6■■■■□ 22.3
TGFBR3-201ENST00000212355 C15orf32Q32M92 178 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 GGTLC1Q9BX51 225 aa11.2□□□□□ -0.62
TGFBR3-201ENST00000212355 LYZL1Q6UWQ5 148 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 HIST3H2BBQ8N257 126 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 TRIOBPQ9H2D6 2365 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 IFI6P09912 130 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 PHLDA1Q8WV24 401 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 NEU4Q8WWR8 484 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 A0A0G2JLM5 398 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 A0A1W2PRE2 83 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 DPM2O94777 84 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 IGKV1-5P01602 117 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 ZNF625Q96I27 306 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 H3BRM9 83 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 H7C1H1 209 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 PI4KAP42356 2102 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 COLCA2A8K830 154 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 IFI27P40305 119 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 PRCDQ00LT1 54 aa11.19□□□□□ -0.62
TGFBR3-201ENST00000212355 A0A087WWL8 130 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 FCN3O75636 299 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 CRYGSP22914 178 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 NTF4P34130 210 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 PAX8Q06710 450 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 TMEM8BA6NDV4 472 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 UBE2CO00762 179 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 SRSF1Q07955 248 aaKnown RBP eCLIP11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 SPACA3Q8IXA5 215 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 IGFBPL1Q8WX77 278 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 MYLKQ15746 1914 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 AKAP6Q13023 2319 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 ZNF688P0C7X2 276 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 CACNG8Q8WXS5 425 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 LRRK1Q38SD2 2015 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 CCL1P22362 96 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 C1orf162Q8NEQ5 155 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 PNRC2Q9NPJ4 139 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 MRPS16Q9Y3D3 137 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-201ENST00000212355 ID3Q02535 119 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 LINC00158P58513 81 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 C8orf46Q8TAG6 207 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 FANCMQ8IYD8 2048 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 TRAV9-2A0A087WT02 112 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 IL18BPO95998 194 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 ZNF672Q499Z4 452 aaPredicted RBP11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 RNF182Q8N6D2 247 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 CFHR3Q02985 330 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 MBNL3Q9NUK0 354 aaKnown RBP11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 AHCTF1Q8WYP5 2266 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 GATD1Q8NB37 220 aa11.17□□□□□ -0.62
TGFBR3-201ENST00000212355 FGF16O43320 207 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 REG4Q9BYZ8 158 aa11.16□□□□□ -0.62
TGFBR3-201ENST00000212355 SAP30O75446 220 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms