RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 XKRY2A2RUG3 117 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 PSG1P11464 419 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 C5orf64Q2M2E5 130 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 TIGITQ495A1 244 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 COA6Q5JTJ3 125 aaKnown RBP20.65■□□□□ 0.9
RTN4R-201ENST00000043402 BTF3L4Q96K17 158 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 SIRPDQ9H106 197 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 RNASE7Q9H1E1 156 aaKnown RBP20.65■□□□□ 0.9
RTN4R-201ENST00000043402 K7EIM0 57 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 GCGP01275 180 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 MYCNOSP40205 109 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 PRDM13Q9H4Q3 707 aa20.65■□□□□ 0.9
RTN4R-201ENST00000043402 TRAPPC1Q9Y5R8 145 aa20.64■□□□□ 0.89
RTN4R-201ENST00000043402 RANP62826 216 aaKnown RBP20.63■□□□□ 0.89
RTN4R-201ENST00000043402 LEMD1Q68G75 181 aa20.63■□□□□ 0.89
RTN4R-201ENST00000043402 STXBP6Q8NFX7 210 aa20.63■□□□□ 0.89
RTN4R-201ENST00000043402 CDC42EP3Q9UKI2 254 aa20.63■□□□□ 0.89
RTN4R-201ENST00000043402 BLNKQ8WV28 456 aa20.63■□□□□ 0.89
RTN4R-201ENST00000043402 CFAP46Q8IYW2 2715 aa20.63■□□□□ 0.89
RTN4R-201ENST00000043402 IGKV1-17P01599 117 aa20.62■□□□□ 0.89
RTN4R-201ENST00000043402 GP9P14770 177 aa20.62■□□□□ 0.89
RTN4R-201ENST00000043402 KLF17Q5JT82 389 aaPredicted RBP20.62■□□□□ 0.89
RTN4R-201ENST00000043402 C9orf152Q5JTZ5 239 aa20.62■□□□□ 0.89
RTN4R-201ENST00000043402 CCDC144NLQ6NUI1 221 aa20.62■□□□□ 0.89
RTN4R-201ENST00000043402 Q8N6K4 173 aa20.62■□□□□ 0.89
RTN4R-201ENST00000043402 NHLRC2Q8NBF2 726 aa20.62■□□□□ 0.89
RTN4R-201ENST00000043402 BPESC1Q9GZL8 116 aa20.62■□□□□ 0.89
RTN4R-201ENST00000043402 PEX7O00628 323 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 AMBPP02760 352 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 TAS2R60P59551 318 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 OSTCQ9NRP0 149 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 TRAV34A0A0B4J273 112 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 PDLIM4P50479 330 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 LYZP61626 148 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 GNG5P63218 68 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 RPEL1Q2QD12 228 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 MINOS1Q5TGZ0 78 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 ASPHD1Q5U4P2 390 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 RASL11BQ9BPW5 248 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 MINOS1-NBL1R4GNA1 71 aa20.61■□□□□ 0.89
RTN4R-201ENST00000043402 SPTAN1Q13813 2472 aaKnown RBP20.6■□□□□ 0.89
RTN4R-201ENST00000043402 IGHV2-70DA0A0C4DH43 119 aa20.6■□□□□ 0.89
RTN4R-201ENST00000043402 NBEAP1P0C6P0 100 aa20.6■□□□□ 0.89
RTN4R-201ENST00000043402 MGST1P10620 155 aaKnown RBP20.6■□□□□ 0.89
RTN4R-201ENST00000043402 YPEL3P61236 119 aaPredicted RBP20.6■□□□□ 0.89
RTN4R-201ENST00000043402 LMO4P61968 165 aa20.6■□□□□ 0.89
RTN4R-201ENST00000043402 CX3CL1P78423 397 aa20.6■□□□□ 0.89
RTN4R-201ENST00000043402 NDPQ00604 133 aa20.6■□□□□ 0.89
RTN4R-201ENST00000043402 COL12A1Q99715 3063 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 TRAV9-1A0A075B6T8 112 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 ISLRO14498 428 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 FRMD6-AS1P0C7T7 363 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 CNN1P51911 297 aaKnown RBP20.59■□□□□ 0.89
RTN4R-201ENST00000043402 HIGD1AQ9Y241 93 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 NCBP2LA6PVI3 153 aaKnown RBP20.59■□□□□ 0.89
RTN4R-201ENST00000043402 OOSP1A8MZH6 123 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 EBI3Q14213 229 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 ZNF562Q6V9R5 426 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 VPS13CQ709C8 3753 aa20.59■□□□□ 0.89
RTN4R-201ENST00000043402 OVOL3O00110 214 aa20.58■□□□□ 0.89
RTN4R-201ENST00000043402 OR8I2Q8N0Y5 310 aa20.58■□□□□ 0.89
RTN4R-201ENST00000043402 TBX15Q96SF7 602 aa20.58■□□□□ 0.89
RTN4R-201ENST00000043402 H3BTX0 84 aa20.58■□□□□ 0.88
RTN4R-201ENST00000043402 TOX4O94842 621 aa20.58■□□□□ 0.88
RTN4R-201ENST00000043402 AJUBAQ96IF1 538 aa20.58■□□□□ 0.88
RTN4R-201ENST00000043402 PGPA6NDG6 321 aa20.57■□□□□ 0.88
RTN4R-201ENST00000043402 CBLN1P23435 193 aa20.57■□□□□ 0.88
RTN4R-201ENST00000043402 JOSD1Q15040 202 aaPredicted RBP20.57■□□□□ 0.88
RTN4R-201ENST00000043402 IBA57Q5T440 356 aaKnown RBP20.57■□□□□ 0.88
RTN4R-201ENST00000043402 LURAP1LQ8IV03 231 aa20.57■□□□□ 0.88
RTN4R-201ENST00000043402 OR5R1Q8NH85 324 aa20.57■□□□□ 0.88
RTN4R-201ENST00000043402 RBM14Q96PK6 669 aaKnown RBP20.57■□□□□ 0.88
RTN4R-201ENST00000043402 SLC25A39Q9BZJ4 359 aaPredicted RBP20.57■□□□□ 0.88
RTN4R-201ENST00000043402 EPDR1Q9UM22 224 aa20.57■□□□□ 0.88
RTN4R-201ENST00000043402 FANCD2OSQ96PS1 177 aa20.56■□□□□ 0.88
RTN4R-201ENST00000043402 ADMP35318 185 aa20.56■□□□□ 0.88
RTN4R-201ENST00000043402 ZNF600Q6ZNG1 722 aa20.56■□□□□ 0.88
RTN4R-201ENST00000043402 OR1L6Q8NGR2 347 aa20.56■□□□□ 0.88
RTN4R-201ENST00000043402 ARPC1AQ92747 370 aa20.56■□□□□ 0.88
RTN4R-201ENST00000043402 MRPL27Q9P0M9 148 aaKnown RBP20.56■□□□□ 0.88
RTN4R-201ENST00000043402 S4R3C0 116 aa20.56■□□□□ 0.88
RTN4R-201ENST00000043402 GATCO43716 136 aaKnown RBP20.55■□□□□ 0.88
RTN4R-201ENST00000043402 SLC25A5P05141 298 aaKnown RBP20.55■□□□□ 0.88
RTN4R-201ENST00000043402 BAGE2Q86Y30 109 aa20.55■□□□□ 0.88
RTN4R-201ENST00000043402 IGLV11-55A0A075B6I3 123 aa20.54■□□□□ 0.88
RTN4R-201ENST00000043402 NPIPB5A8MRT5 1133 aa20.54■□□□□ 0.88
RTN4R-201ENST00000043402 TMEM11P17152 192 aa20.54■□□□□ 0.88
RTN4R-201ENST00000043402 SGK494Q96LW2 274 aa20.54■□□□□ 0.88
RTN4R-201ENST00000043402 UBE2E1P51965 193 aa20.53■□□□□ 0.88
RTN4R-201ENST00000043402 PKIAP61925 76 aa20.53■□□□□ 0.88
RTN4R-201ENST00000043402 DEFA6Q01524 100 aa20.53■□□□□ 0.88
RTN4R-201ENST00000043402 TMEM183BQ1AE95 376 aa20.53■□□□□ 0.88
RTN4R-201ENST00000043402 FAM120AOSQ5T036 256 aa20.53■□□□□ 0.88
RTN4R-201ENST00000043402 FAM168AQ92567 244 aa20.53■□□□□ 0.88
RTN4R-201ENST00000043402 IGHV4-39P01824 125 aa20.53■□□□□ 0.88
RTN4R-201ENST00000043402 GZMBP10144 247 aa20.53■□□□□ 0.88
RTN4R-201ENST00000043402 TBL2Q9Y4P3 447 aaKnown RBP20.53■□□□□ 0.88
RTN4R-201ENST00000043402 IGSF10Q6WRI0 2623 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 A0A1B0GUS0 222 aa20.52■□□□□ 0.88
RTN4R-201ENST00000043402 CA1P00915 261 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms